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6 protocols using actin a2228

1

LTβR Signaling Pathway Evaluation

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Stimulation: LIGHT (664-LI R&D systems), goat anti-human LTβR antibody (9 (link)). Detection antibodies: Cell Signaling Technology (EWS 11910, phospho-ERK-1/−2 9101, phospho-p38 9211), Santa Cruz Biotechnology (EWS sc-28327 AF647, TRAF3 sc-1828), Thermo (TRAF3 12H13L59), Abcam (p100 ab32859), and Sigma (Actin A2228).
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2

Immunoblotting for Protein Expression Analysis

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To analyze protein expression in cells, immunoblotting was performed according to standard methods [7 (link)]. The REDD1 primary antibody for immunoblotting (10638–1-AP) was obtained from Proteintech. Actin (A2228, Sigma Aldrich, US) was used as a loading control. Anti-rabbit (cs-7074) and anti-mouse (cs-7076) secondary antibodies bound to HRP were obtained from Cell Signaling Technology (Massachusetts, US). The protein bands were visualized with chemiluminescent reagents (Millipore, US).
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3

Analyzing FGFR4 Expression via Immunoblotting

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Cells were lysed by the addition of 50 mM Tris-HCl, 150 mM NaCl, 1 mM EDTA, 1 mM dithiothreitol, 1 mM α-phenylmethylsulfonyl fluoride, 1 mM Na3VO4, 100 mM NaF, and 1% Triton X-100, pH 7.4. Following SDS-PAGE and transfer to nitrocellulose membrane, FGFR4 signal was detected via immunoblotting: Cell Signaling Technology (FGFR4: #8562) or Sigma Aldrich (Actin: A2228). Antibody specificity was verified via the molecular weight of FGFR4, a decrease in signal upon use of an siRNA against FGFR4 (not shown), and restored signal with transfection of an FGFR4 expression plasmid.
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4

Multiparametric Analysis of Cellular Signaling

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The following were used: Merlin (sc-332) and NEDD4 (sc-25508) from Santa Cruz, CA; phospho-histone H3 ser10 (H0412), AMOTL1 (HPA001196), and actin (A2228) from Sigma-Aldrich; YAP (#4912), p27 (#2552), AIP4 (#12117), and cleaved caspase 3 (#9661) from Cell Signaling Technology (Ozyme, France); E-cadherin (610182) from BD Biosciences; phospho-Src Y418 (44-660G) and phospho-FAK Y397 (44-624G) from Invitrogen; AMOTL1 p-S262 Covalab (pab0956-P, Lyon, France); and Tead2 Covalab (pab0961-P, Lyon, France).
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5

Western Blot Analysis of Protein Fractions

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Nuclear and cytosplasmic fractions were separated with NE-PER extraction reagents, following the manufacturer’s instructions (Thermo Scientific). Protein yield was quantified via Coomassie Blue assay (Pierce), diluted in PBS, and combined with Laemmli sample buffer/2.5% β mercaptoethanol (1:1) (Bio Rad). Samples were heated to 95°C for 10 minutes and directly placed on ice. 10 ug protein were loaded to Criterion Stain-free gels and electrophoresed for 1 hour at 200v in 1X Tris/Glycine/SDS buffer (Bio Rad). Protein was transferred to PVDF membranes on a Trans-blot turbo transfer system following manufacturer’s instructions (Bio Rad) then blocked for 1 hour in 5% milk and TBST (0.1% tween). Membrane was incubated with primary antibody overnight at 4°C (1:200, Hmox 1: ab13243 (Abcam), actin: a2228 (Sigma) and Nrf2 sc-722 (Santa Cruz Biotechnology)) followed by secondary antibody at 1:10,000 concentration for one hour r.t. (HRP conjugated goat α rabbit, Invitrogen 31460). The membrane was developed with SuperSignal West Pico PLUS Chemiluminescent substrate (Thermo Scientific) and imaged for both total protein and HRP signal on a BioRad ChemiDoc MP imaging system.
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6

Western Blot Analysis of Protein Markers

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Proteins were extracted as previously described. 30 Protein (20 µg of total protein lysate per sample) was subjected to western blot (WB) analysis using standard protocols. EZH2 (#5246) and SLUG (#9585) antibodies were purchased from Cell Signaling Technology (USA); YY1 (ab109237), integrinβ3 (ab75872) and c-myc (ab32072) antibodies were obtained from Abcam (USA). Actin (A2228), used to normalize protein expression, was purchased from Sigma Aldrich (Italy). The secondary antibodies anti-rabbit and anti-mouse were purchased from Santa Cruz Biotechnology (USA).
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