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2 protocols using anti cd4 allophycocyanin

1

T-B Cell Activation and Phenotyping

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Day 3 primary T cells and day 1 primary B cells were incubated with peptide and anti-CD40 as described above in 1:1 and 1:10 T/B cell ratios at a total density of 5 × 106 cells per/mL. Three days later they were stained with anti CD4 allophycocyanin (ebioscience clone GK1.5), ICOS PE (ebioscience clone 7E.17G9) and PD1 FITC (ebioscience clone J43) for T-cell marker analysis. CXCR5 bio (BD clone 2G8) was used in combination with streptavidin PerCP (BD). For B-cell staining, GL7 FITC (BD), CD95 PE (BD) and CD19 allophycocyanin (BD, clone 1D3) were used.
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2

Splenic Immune Cell Profiling by FACS

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Single-cell suspensions were prepared from the spleen samples and stained for FACS (fluorescence activated cell sorting) analysis as previously described (Shinno-Hashimoto et al., 2022 (link); Zhang et al., 2021b (link)). The following antibodies were used for immunofluorescence staining: anti-CD3-FITC (x40, cat# 100305: BioLegnd, San Diego, CA), anti-CD4-allophycocyanin (x100, cat# 17-0042-82: eBioscience, San Diego, CA), anti-CD8a-allophycocyanin (x100, cat# 553035: BD Bioscience), anti-NK1.1-PE (x100, cat# 553165: BD Bioscience), anti-Ly6c-FITC (x100, cat# 553104: BD Bioscience), anti-CD11b-PE (x400 diluted using FACS buffer, cat# 553312: BD Bioscience, Franklin Lakes, NJ), anti-CD11c-PE (x100, cat# 557401: BD Bioscience), anti-Ter119-PE (x40, cat# 12-5921-83: eBioscience, San Diego, CA), anti-F4/80-PE (x40, cat# 12-4801-80: Invitrogen), and anti-B220-PE (x200, cat# 553309: BD Bioscience). The stained cells were analyzed using a FACSCanto II and FlowJo software (BD Bioscience).
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