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7 protocols using isotype control mab

1

Quantifying T cell Populations

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T cells were isolated from the spleen and inguinal lymph nodes of the iTreg-treated, iTregmtDC-treated, and CIA mice on day 49 after the primary immunization. These cells were incubated with an anti-mouse CD4-FITC mAb, fixed, permeabilized, stained with anti-mouse FoxP3-PE, IL-17-PE, or isotype control mAbs (BD Biosciences Pharmingen), and then assessed by flow cytometry.
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2

Apoptosis and T-cell Activation Assay

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AnnexinV-FITC/PI Kit (KeyGen Biotechnology, Nanjing, China) was used to evaluate the effect of FICZ and ITE on the apoptosis of PBMCs. For analysis of the frequency of Th1 and Th17, the cells were stimulated by adding PMA (50 ng/mL, Sigma-Aldrich, St. Louis, MO) and ionomycin (1 ug/mL, Sigma) for 1 h at 37°C. Then, brefeldin A (10 ug/mL, Sigma) was added for another 4 h; the cells were fixed and permeabilized using the eBioscience Cytofix/Cytoperm kit according to the manufacturer's instructions and then incubated with CD3-(PerCP)-Cy5.5, anti-human CD8-APC, anti-human IL-17A-PE, and anti-human IFN-γ-FITC (BD Biosciences). For phosphorylated STAT staining, stimulated CD4+T cells were fixed with Fix buffer (BD Biosciences) for 10 min at 37°C, permeabilized with Perm buffer (BD Biosciences) for 30 min on ice, and stained with anti-human pSTAT3-PE, anti-human pSTAT4-Per-cy5.5, anti-human pSTAT4-Per-cy5.5, anti-human pSTAT5-PE, or isotype control mAbs (BD Biosciences). Flow cytometric analysis was performed on a FACScan flow cytometer (BD Biosciences) to measure mean fluorescence intensity (MFI). Results were expressed as the percentage difference compared with isotypic control (IC) using the formula [mean fluorescence intensity (MFI) of sample − MFI of IC]/MFI of IC.
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3

FCRL6+ Pro B Cell Phosphorylation

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FACS sorted FCRL6+ and FCRL6 pro B (CD43+CD19+B220hiIgM) cells from adult BM were treated with the phosphatase inhibitor pervanadate (NaVO4) for 10 min. Stimulated cells were fixed with prewarmed Phosflow Lyse/Fix buffer (BD) at 37°C for 10 min and permeablized with Phosflow Perm Buffer III (BD). After Fc blockade (CD16/32), cells were stained with anti-phospho ERK pT202/pY204, STAT5 Y694, or isotype control mAbs (BD) for 30 min at room temperature. Phosphorylation was analyzed using a FACSCalibur flow cytometer (BD) and plotted with FlowJo software. The fold induction change in phosphorylation for FCRL6 and FCRL6+ pro B cells was calculated by comparing the MFI ratios of FCRL6/FCRL6+ pro B cells with and without stimulation.
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4

Immunophenotyping of Murine Leukocytes

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RPMI 1640 medium and fetal bovine serum were obtained from PAA Laboratories (Linz, Austria). Fluorescein-conjugated monoclonal antibodies (mAbs), including isotype control mAbs and mAbs against H-2K b , H-2K d , CD4, CD8, CD11c, CD62L, and CD44, were purchased from BD Pharmingen, BioLegend, or eBioscience Laboratories (San Diego, CA). A 2% acetic acid solution was prepared as a white blood cell (WBC) diluent. FASTLysing™ Solution was obtained from Immuno Probe (Sigma-Aldrich Co. LLC, St. Louis, MO, USA).
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5

Murine Myeloid Cell Activation Assay

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RPMI1640 and DMEM were obtained from Gibco Grand Island. Phosphate-buffered saline (PBS) was purchased from Thermo Fisher Scientific Inc. Recombinant mouse GM-CSF, M-CSF, IL-4, and IL-13 were purchased from PeproTech. ELISA kits for murine TNF-α, IL-10, and IL-12p40 were purchased from BioLegend. Fluorescein-conjugated mAbs against F4/80, CD11b, CD40, CD80, CD86, MHC-II, CD206, Gr-1, NK1.1, CD3, NKp46, NKG2D, CD107a, granzyme B (GrB), interferon (IFN)-γ, isotype control mAbs and carboxyfluorescein diacetate succinimidyl ester (CFSE) were purchased from BD Pharmingen. Antibodies against ERK, p-ERK, AKT, p-AKT, p38 mitogen-activated protein kinase (p38MAPK), p-p38MAPK, signal transducer and activator of transcription (STAT3), p-STAT3 and β-actin were purchased from Cell Signaling Technology. The ERK phosphorylation inhibitor AG126 was purchased from Selleck company. An enhanced chemiluminescence detection kit for the western blot assay was purchased from Santa Cruz. The MagniSort Mouse CD49b Positive Selective Kit was purchased from Invitrogen. Ultraleaf-purified anti-mouse NK1.1 antibody was purchased from BioLegend.
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6

Cytokine Profiling of Activated DETCs

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Purified DETCs were stimulated on 96-well plates (5 × 104 cells/well) coated with 10 μg/mL anti-TCR Cδ mAb (UC7-13D5, BD Biosciences) or isotype control mAb (BD Biosciences) in IMDM supplemented with 10% FCS and 50 μM 2-mercaptoethanol (Nacalai Tesque, Kyoto, Japan) for 24 hours at 37°C. Culture supernatants were harvested and replaced with fresh culture medium, and DETCs were stimulated for an additional 24 hours. Cytokine levels in the supernatants were determined using Quantikine™ ELISA kits (R&D Systems, Minneapolis, MN).
Epidermal cells were stimulated on 24-well plates (1 × 106 cells/well) coated with 10 μg/mL anti-TCR Cδ mAb in IMDM supplemented with 10% FCS, 50 μM 2-mercaptoethanol, and 10 ng/mL recombinant mouse IL-2 (R&D Systems) in the presence of DMSO (Sigma–Aldrich) or 3 mM 2-DG (MedChemExpress, Monmouth Junction, NJ) for 3 days at 37°C. At the time of use, DETCs were harvested by incubation with 1 mM EDTA in PBS for 3 minutes.
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7

T Cell Differentiation Assays with Atg5 Knockout BMDM

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T cell differentiation assays were, respectively performed as previously described [15 (link)]. In brief, irradiated EG7 tumor cells (1 x 106) were loaded to Atg5flox/flox or LysM-Atg5-/- BMDM (1 x 105) to facilitate phagocytosis and antigen processing. Two hours after the EG7 cells were loaded, they were extensively washed, and then cultured with CD4+ or CD8+ T cells from wild-type mice for 96 h. Cells were stained with anti-CD3, -CD4, or -CD8 mAbs, fixed and permeabilized with Cytofix / Cytoperm (BD Biosciences). Cells were then further stained with anti-IFN-γ, anti-IL-4, anti-IL-17, anti-Foxp3, anti-granzyme-B and isotype control mAb (BD Biosciences), and analyzed by flow cytometry.
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