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6 protocols using 6 well ultra low attachment surface dishes

1

Isolation and Culture of ALDH1 Cells

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ALDH1high and ALDH1low cells were isolated by FACS and then cultured in 6-well ultra-low attachment surface dishes (Corning, Tewksbury, MA, USA) at 5,000 cells per well. The cells were cultured in stem-cell medium, serum-free DMEM/F12 (Life Technologies) supplemented with N-2 supplement (Life Technologies), 10 ng/ml recombinant human epithelial growth factor (R&D Systems, Minneapolis, MN, USA), 10 ng/ml human basic fibroblast growth factor (R&D Systems). Morphological change was observed daily under a light microscope for 28 days. Round cell clusters >100 μm were judged as spheres.
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2

Sphere Formation Assay in Serum-free Medium

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Cells (1×104/well) were cultured in 6-well ultralow attachment surface dishes (Corning Inc., Corning, NY, USA). The cells were cultured in serum-free Dulbecco's modified Eagle's medium/F12 (Hyclone; GE Healthcare Life Sciences) supplemented with 20 ng/ml recombinant human epithelial growth factor (Peprotech EC Ltd., London, UK), 10 ng/ml human basic fibroblast growth factor (Peprotech EC Ltd.) and B27 (Gibco; Thermo Fisher Scientific Inc., Waltham, MA, USA). The number of spheres >50 µm3 was counted after 14 days of cell culture with an inverted microscope (CKX41; Olympus Corporation, Tokyo, Japan).
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3

Culturing HCC Cells for Sphere Formation

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HCC cells were cultured in 6-well ultra-low attachment surface dishes (Corning) at the cell density of 2,000 cells/well with stem-cell medium, serum-free DMEM/F12 (Life Technologies) supplemented with N-2 supplement (Life Technologies), 10 ng/mL recombinant human epithelial growth factor (R&D Systems), 10 ng/mL human basic fibroblast growth factor (R&D Systems). Two weeks after cell seeding, sphere formation was observed under a light microscope. A cell cluster with the diameter longer than 100 µm was regarded as a sphere.
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4

Sphere Formation Assay for Cancer Cells

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Cells were cultured in 6-well ultralow attachment surface dishes (Corning Inc., Corning, NY, USA) at 3,000 cells per well for RMG1 and HMOA and at 1,000 cells per well for AMOC2, because formation of countable spheres was difficult with RMG1 and HMOA at 1,000 cells per well. The number of spheres was counted only spheres which diameter was over 50 μM after 7 days of cell culture, under light microscopy. The cells were cultured in serum-free DMEM/F12 (Invitrogen) medium supplemented with 20 ng/ml recombinant human epithelial growth factor (Life Technologies) and 10 ng/ml human basic fibroblast growth factor (Sigma-Aldrich).
Wnt3a, Wnt5a and MMP10 (R and D systems) were added at concentrations of 200 ng/mL, 1000 ng/mL and 10U, respectively.
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5

Aptamer-conjugated PLGA Nanoparticles for CD133+ Cell Targeting

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Poly(DL-lactide-co-glycolide) (PLGA) with a molar ratio of lactide:glycolide of 50:50 (40–75 kDa), polyvinyl alcohol (PVA; 30–70 kDa), RA and organic reagents were all purchased from Sigma-Aldrich; EMD Millipore (Billerica, MA, USA). The lipids, including [(1,2-distearoyl-sn-glycero-3- phosphoethanolamine-N-maleimide- polyethylene glycol-2000; DSPE-PEG-Mal, 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine-N-carboxyfluorescein; PECF)], phosphatidylcholine, and cholesterol were purchased from Avanti Polar Lipids (Alabaster, AL, USA). The CD133 MicroBead kit was provided by Miltenyi Biotec, Inc. (Shanghai, China). The ultra-low attachment surface 6-well dishes were purchased from Corning Life Sciences (Tewksbury, MA, USA). R&D Systems, Inc. (Minneapolis, MN, USA) provided recombinant anti-human CD133 Alexa Fluor® 488-conjugated antibody (cat. no. FAB11331G). The synthesis of CD133 aptamers with the sequence of 5′-SH-CCCUCCUACAUAGGG-3′ was performed by Ruibo Co., Ltd. (Guangzhou, China). The Pierce BCA Protein Assay kit, FBS, B27, epidermal growth factor (EGF), basic fibroblast growth factor (bFGF), insulin-transferrin-selenium (ITS), 4′,6′-diamidino-2-phenylindole dihydrochloride (DAPI) and the cell dissociation reagent (StemPro® Accutase®) were purchased from Thermo Fisher Scientific, Inc. (Waltham, MA, USA).
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6

Evaluating Lung Cancer Stem Cells

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Tumorsphere formation of the lung cancer cells was assessed to evaluate the self-renewal ability of the lung cancer initiating cells when the single cells were suspended in serum-free medium. In short, lung cancer cells suspended in stem cell medium were cultured in Corning® ultra-low attachment surface 6-well dishes. The density of the suspended cells was 5,000 cells/well, and the components of the stem cell medium included DMEM/F12, B27 (1×), ITS (1X), EGF and bFGF (both cytokines were at a concentration of 20 ng/ml). The cells were cultured in the stem cell medium for 7 days at 37°C, following which the tumorspheres were counted under an Olympus CKX41 conventional light microscope. For the second-passage tumorspheres, those of the first passage were washed with PBS and dissociated with a cell dissociation reagent (StemPro® Accutase®), and then propagated.
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