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8 protocols using anti gapdh antibody sc 25778

1

Aspirin Analogue Synthesis and Characterization

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Foetal bovine serum (FBS) was purchased from PAA Laboratories (GE Healthcare Life Sciences, Little Chalfont, UK) or Labtech International, Ltd. (Heathfield, UK). Precision Plus Protein Colour standards and nitrocellulose were obtained from Bio-Rad Laboratories, Inc. (Hercules, CA, USA). Human recombinant EGF (PHG0313) was from Thermo Fisher Scientific, Inc. (Waltham, MA, USA). Alexa Fluor 555-EGF (E-35350) was from Molecular Probes; Thermo Fisher Scientific, Inc. EGFR (D38B1) XP® rabbit antibody (Alexa Fluor 488-conjugate; 1:100; cat. no. 5616) and EGFR rabbit antibody (D38B1; 1:100; cat. no. 4267) were from Cell Signaling Technology, Inc. (Danvers, MA, USA). Anti-early endosome antigen 1 (EEA1) antibody (1G11) Early Endosome Marker (ab70521; 1:1,000) was from Abcam (Cambridge, UK). Anti-GAPDH antibody (sc-25778; 1:1,000) was from Santa Cruz Biotechnology, Inc. (Dallas, TX, USA). VectaShield® mounting medium was from Vector Laboratories, Ltd. (Peterborough, UK). All other reagents were obtained from Sigma-Aldrich; Merck KGaA (Darmstadt, Germany), unless stated otherwise. Aspirin analogues, detailed in Table I, were synthesised in-house using previously described methods (26 (link),27 (link)).
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2

Western Blot Analysis of SOX7 Protein

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Total protein was extracted from cells using the radioimmunoprecipitation assay (RIPA) lysis buffer (Beyotime Institute of Biotechnology, Shanghai, China). Protein concentration was determined using the BCA method. The proteins were separated by the SDS-PAGE using the Mini-PROTEAN Tetra instrument (Bio-Rad Laboratories, Inc., Hercules, CA, USA), then transfered onto PVDF membranes (Bio-Rad Laboratories, Inc.). The membranes were blocked by 5% BSA and incubated overnight at 4°C with specific primary antibody rabbit polyclonal anti-SOX7 antibody (ab220293, 1:1,000; Abcam, Cambridge, UK). After that, the membrane was incubated in the secondary antibody goat polyclonal anti-rabbit IgG H&L secondary antibody (ab150077, 1:2,000; Abcam) at room temperature for 1 h. Anti-GAPDH antibody (sc-25778; 1:3,000; Santa Cruz Biotechnology, Inc., Dallas, TX, USA) was used as a loading control at 4°C overnight. Signal was measured using the GelDoc 2000 instrument (Bio-Rad Laboratories, Inc.).
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3

Investigating AXL Signaling Cascade

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Both DN10764 and BGB324 were purchased from Selleck Chemicals. The following antibodies were used in this study. Anti-AXL (#AF154) and anti-phospho-AXL (Y779, #AF2228) antibodies were purchased from R&D Systems. Anti-phospho-AKT (S473, #4060), anti-AKT (#4685), anti-phospho-ERK (#9106), anti-ERK (#4695), anti-PARP (#9542), anti-cleaved PARP (#5625), anti-pro-CASPASE 3 (#9665), anti-CASPASE 3 (#9661), and anti-phospho-AXL (Y702, #5724) antibodies were purchased from Cell Signaling Technology. An anti-GAPDH antibody (sc-25778) was purchased from Santa Cruz Biotechnology, Inc. Human GAS6 was purchased from R&D Systems.
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4

Extraction and Immunoblotting of Organ Proteins

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After heart perfusion, the indicated organs were collected, homogenized in bead tubes
(Sarstedt, Nümbrecht, Germany), and proteins were extracted using T-Per Tissue Protein
Extraction Reagent (Thermo Fisher Scientific). Proteins were separated by sodium dodecyl
sulphate polyacrylamide gel electrophoresis (SDS-PAGE), transferred to polyvinylidene
fluoride membranes (Immobilon, Millipore, Billerica, MA, USA), and blocked overnight in 5%
skimmed milk (DIFCO, BD Biosciences, Franklin Lakes, NJ, USA). The membranes were then
incubated at room temperature for 1 h with primary anti-FLAG antibody (F1804;
Sigma-Aldrich, St. Louis, MO, USA) and anti-GAPDH antibody (sc-25778; Santa Cruz
Biotechnology, Dallas, TX, USA). After washing three times in 0.05% Tween in Tris-buffered
saline, the membranes were incubated for 1 h at room temperature with secondary anti-mouse
IgG horseradish peroxidase (HRP)-linked whole antibody (NA931; GE Healthcare Life
Sciences, Chicago, IL, USA) and anti-rabbit IgG HRP-linked whole antibody (NA934; GE
Healthcare Life Sciences), and were detected using an iBright CL1000 Imaging System
(Thermo Fisher Scientific).
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5

Antibody sources for protein analysis

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Anti–MAP1LC3-I/II antibody (M115-3) was from Medical & Biological Laboratories, anti-SIRT3 antibody (C73E3) was from Cell Signaling Technology, anti-Tom20 antibody (sc-17764) and anti-GAPDH antibody (sc-25778) were from Santa Cruz Biotechnology, anti–cyclophilin D antibody (ab110324) and anti–COX IV antibody (ab110261) were from Abcam, and anti-actin antibody (MAB1501R) was from Millipore. Anti-human ASS1 antibody and the lentiviral sh-ASS1 construct were from L.-J. Shen (83 (link)).
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6

VEGF Protein Expression Analysis

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Twenty-five micrograms of protein was resolved in NuPAGE® Novex 4–10% Bis-Tris gel (Life Technologies, NY, USA) in NuPAGE® MOPS/MES SDS running buffer (Life Technologies, NY, USA) and immunoblotted with monoclonal mouse anti human-VEGF antibody (sc-7269; Santa Cruz Biotechnology; 1:500 dilution). Anti-GAPDH antibody (sc-25778; Santa Cruz; 1:5000 dilution) served as a loading control. The blots were visualized by enhanced chemiluminescence (Supersignal® West pico; Pierce Biotechnology, Rockford, IL, USA) and images were detected in a Fujifilm Las-4000 scanner.
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7

Adipocyte Lipolysis and Autophagy Regulation

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Forskolin (F6886), NH4Cl (A9434) and leupeptin (L2884) were purchased from Sigma–Aldrich (St. Louis, MO, USA). H89 (#371962) and KT5823 (#420321) were from Calbiochem (San Diego, CA, USA). Anti-perilipin 1 (#9349), anti-HSL (#4107), anti-pHSL (Ser552)(#4139), anti-pHSL (Ser554)(#4137), anti-pHSL (Ser650)(#4126), anti-acetyl-CoA carboxylase (#3676), anti-adiponectin (#2789), anti-CCAAT/enhancer-binding protein α (C/EBPα) (#8178), anti-fatty acid binding protein 4 (FABP4) (#3544) and anti-fatty acid synthase (FAS) (#3180), anti-p62/SQSTM1 (#5114s) antibodies were from Cell Signaling Technology (Beverly, MA, USA). Anti-beclin-1 (NB110-87318), anti-Atg5 (NB110-53818), and anti-LC3 antibody (NB100-2220) was purchased from Novus Biologicals (Littleton, CO, USA). Anti-GAPDH (SC-25778) antibody was from Santa Cruz Biotechnology (Dallas, TX, USA).
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8

Modulation of NF-κB Signaling Pathways

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TNF-α was purchased from PEPRO TECH (Rocky Hill, USA). RANKL was purchased from R&D Systems (Minneapolis, MN). Cycloheximide (CHX) was purchased from MP Biomedicals (Irvine, CA, USA). BAY 11-7082, LPS and MG132 were purchased from Sigma-Aldrich (St Louis, MO, USA). The anti-TAZ V386 (25937), anti-CYR61 (3491), anti-p100/p52 (4882), anti-RelA (8242) and anti-RelB (4954) antibodies used for WB were purchased from Cell Signaling Technology (Danvers, MA, USA). Anti-tubulin (F7425) and anti-YAP (WH0010413 M1) antibodies were purchased from Sigma-Aldrich. Anti-GAPDH (sc-25778) antibody was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). The anti-p100/p52 (ab7972) antibody used for ChIP assays was purchased from Abcam (Cambridge, MA).
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