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3 protocols using irdye 800cw goat anti rabbit immunoglobulin g igg

1

Immunoblotting and Immunofluorescence Assay Protocol

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Blebbistatin (B05060), low-endotoxin BSA (A8806), PA (P9767), and Y27632 (Y0503) were from Sigma Aldrich (St. Louis, MO), while cis-PO/palmitoleic acid (10009871) was from Cayman Chemicals (Ann Arbor, MI). Antibodies used for immunoblotting were α-actinin (Millipore Sigma; A7811), β-actin (Cell Signaling; 4790), α-catenin (ThermoFisher; 13-9700), β-catenin (BD Biosciences; 610153), VE-cadherin (Santa Cruz; 9989), RhoA (Santa Cruz; c-418), IRDye 800CW goat anti-rabbit immunoglobulin G (IgG) (LI-COR; 9253211), and IRDye 680LT goat anti-mouse IgG (92668070). Antibodies and reagents used for immunofluorescence were α-catenin (ThermoFisher; 13-9700), β-catenin (BD Biosciences; 610153), DAPI (4’,6-Diamidino-2-phenylindole, dihydrochloride; ThermoFisher; D1306), GM130 (BD Biosciences; 610823), phospho-MLC (Cell Signaling; 3674), phalloidin (Alexa Fluor 555) (ThermoFisher; A34055), phospho-YAP S127 (Abcam; 76252), YAP (Cell Signaling 14074), VE-cadherin (Santa Cruz; 9989), goat anti-rabbit IgG secondary antibody (Alexa Fluor 488) (ThermoFisher; A11008), goat anti-mouse IgG secondary antibody (Alexa Fluor 647) (ThermoFisher; A21235). Dako fluorescence mounting medium (S3023) was from Aligent. Y227632 (Y0503) was from Millipore Sigma (Burlington, MA). The plasmid encoding GFP–β-actin was kindly provided by Sergio Grinstein (Hospital for Sick Children, Toronto, Ontario, Canada).
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2

Serum Biomarker Profiling in Mice

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Analyses of serum CK, ALT, AST, ALP, bilirubin, creatinine, urea, and albumin levels were performed by the pathology laboratory at the Mary Lyon Centre, Medical Research Council, Harwell, Oxfordshire, UK.
For MYOM3 detection, mouse sera were diluted at 1:20 before loading onto 3%–8% Criterion XT Tris-acetate protein gel, following the manufacturer’s instructions (Bio-Rad, France). MYOM3 protein was detected by probing the nitrocellulose membrane with MYOM3 primary rabbit polyclonal antibody (Proteintech, Manchester, UK), followed by incubation with a goat anti-rabbit secondary antibody (IRDye 800CW goat anti-rabbit immunoglobulin G [IgG], LI-COR Biosciences, Germany). Bands were visualized using the Odyssey imaging system (LI-COR Biosciences, Lincoln, NE USA). Signal intensities in treated samples were quantified and normalized to PBS control mice signals using the Image Studio software (LI-COR Biosciences, Germany).
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3

Survivin Protein Expression Analysis

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Snap-frozen tumors were digested with radioimmunoprecipitation assay lysis buffer containing phosphatase inhibitors (Sigma). Protein concentrations were measured with a Pierce BCA protein assay (23227, Thermo Scientific, MA, USA). 50 μg of protein per sample was separated on 12% SDS-PAGE and then electro-blotted onto nitrocellulose membranes using the iBlot Dry Blotting System (Thermo Scientific). Membranes were blocked with 3% bovine serum albumin in PBS with 0.02% Tween 20 (PBST) for 1 h and then probed with rabbit anti-survivin antibody (1:10,000 dilution; Ab 76424, Abcam) at 4°C overnight (16 h). Following three washes with PBST, the membrane was incubated with IRDye 800CW goat anti-rabbit immunoglobulin G (IgG) (1:5,000 dilution, 925-32211, LI-COR Biosciences, NE, USA) for 1 h. Expression of GAPDH was used as a loading control using a mouse anti-GAPDH antibody (1:10,000 dilution, MAB374, Sigma) and IRDye 680CW goat anti-mouse IgG secondary antibody (1:5,000 dilution, 926-32220, LI-COR Biosciences). The fluorescent signal was measured using the Odyssey imaging system (LI-COR Biosciences). The same protocol was used to measure survivin levels in cell lysates.
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