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5 protocols using nbp2 33422

1

Renal Tubular Epithelial Cell Characterization

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Human renal TECs and epithelial cell medium were obtained from ScienCell. Iohexol was obtained from GE Healthcare and Mannitol was obtained from Sigma. Mouse anti-rabbit IgG and Mouse anti-rat IgG antibodies were purchased from Cell Signaling Technology. We obtained antibodies targeting caspase-11 (Sigma, clone 17D9), caspase-4 (Abcam., ab40887), caspase-5 (Abcam, ab25898), IL-1β (R&D Systems, AF-401-NA), GAPDH (Cell Signaling Technology, #2118), Gsdmd (Novus Biologicals, NBP2-33422), and cytokeratin-18 (Abcam, ab668). Pan-caspase inhibitor Z-VAD-FMK was obtained from R&D Systems.
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2

Western Blot Analysis of Inflammasome Proteins

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Total proteins were extracted from mice corneas or HCECs using a cell lysis buffer (Solabao, #R0010) and measured by the BCA protein assay kit (Thermo Scientific, #23227). Equivalent protein samples were separated by 4-20% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) (Bio-Rad, USA), and then transferred to PVDF membranes (Millipore, USA). The membranes were blocked with 5% skimmed milk diluted in TBST for 1 h and then incubated with primary antibodies at 4°C overnight. Primary antibodies targeting NLRP3 (1:500, ABcam, #ab263899), CASP1 (1:200, ABclonal, #A0964), ASC (1:200, Santa Cruz Biotechnology, #sc-514414), IL-1β (1:200, CST, #63124 or #83186), IL-18 (1:200, ABclonal, #A16737), GSDMD (1:500, Novus Biologicals, #NBP2-33422), and β-actin (1:1000, ABcam, #ab8226) were used. Then, the membranes were incubated with HRP-conjugated secondary antibodies (1:2000, CST, #7074 or #7076) for 1 h at room temperature. The immunoblots were detected with enhanced chemiluminescence (ECL, Thermo Scientific, #32106) reagents and recorded by Image Lab software (Bio–Rad, USA).
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3

Immunoblotting Analysis of Pyroptosis Markers

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Cells or tissue lysates and immunoblotting analysis were performed as described previously (Zhang Z. et al., 2020 (link)). Densitometric analysis was conducted using ImageJ software. The primary antibodies used for Western blot included caspase-1 (1:1,000, Abcam, United Kingdom, ab1872), GSDMD (1:1,000, Novus Biologicals, United States, NBP2-33422), caspase-4 (1:1,000, Abcam, United Kingdom, ab238124), caspase-11 (1:1,000, Abcam, United Kingdom, ab262899), and GAPDH (1:10,000, Abcam, United Kingdom, ab181603). All the experiments were repeated at least three times.
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4

Antibody Detection Protocol for Inflammasome

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Antibodies used include GSDMD rabbit polyclonal Ab (Novus Biologicals, NBP2-33422), CARD8 C-terminus rabbit polyclonal Ab (Abcam, Ab24186), PARP rabbit polyclonal Ab (Cell Signaling Tech, 9542), GAPDH rabbit monoclonal Ab (Cell Signaling Tech, 14C10), mouse GSDMD rabbit monoclonal Ab [EPR19828] (Abcam, ab209845), DPP9 rabbit polyclonal (Abcam, ab42080), PEPD rabbit monoclonal Ab (EPR16959; Abcam, ab197890), XPNPEP1 (Abcam, ab123929), GSDMD rabbit monoclonal Ab [EPR20829-408] (Abcam, ab215203), MYC tag rabbit monoclonal Ab (Cell Signaling Tech, 2278), HA tag rabbit monoclonal Ab (Cell Signaling Tech, 3724), IRDye 800CW donkey anti-rabbit (925-32211), IRDye 680RD donkey anti-rabbit (925-68073), IRDye 800CW donkey anti-mouse (925-32212), IRDye 680RD donkey anti-mouse (925-68072), and IRDye 800CW donkey anti-goat (925-32214).
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5

Immunofluorescence Analysis of Gasdermin D and Lipid A

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BV-2 cells were treated with BSA or PA-BSA for 4 h and then washed with PBS twice. After fixation with 4% paraformaldehyde (PFA) for 15 min, cells were permeated with 0.25% Triton X-100. Primary antibodies for detecting the N terminal of gasdermin D (GSDMDC1, Novus, NBP2-33422, 1:200) and lipid A (Abcam, ab8467, 1:100) were incubated with cells overnight at 4°C. After washing with PBS three times, cells were incubated with Alexa Fluor 594-AffiniPure Goat Anti-Rabbit IgG and Fluorescein (FITC)-AffiniPure Goat Anti-Mouse IgG (Jackson ImmunoResearch, 111-585-003 and 115-095-003) at room temperature for 1 h. Finally, nuclei were counterstained with 4’,6-diamidino-2-phenylindole (DAPI). Images were then captured under a fluorescence microscope (OLYMPUS BX41, Japan).
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