The largest database of trusted experimental protocols

Calcein

Manufactured by Keyence
Sourced in Japan

Calcein is a fluorescent dye used in various laboratory applications. It is commonly used as a cell viability marker, allowing researchers to visualize and quantify living cells. Calcein exhibits green fluorescence when it interacts with live cells, providing a reliable indicator of cellular health and activity.

Automatically generated - may contain errors

5 protocols using calcein

1

In Vivo Bone Formation Imaging

Check if the same lab product or an alternative is used in the 5 most similar protocols
To assess bone formation and remodeling in vivo, animals received two fluorescent calcium–binding dyes 1 week before euthanizing. The first fluorophore, alizarin (2 wt % in 2 wt % NaHCO3, 20 mg/kg; Fluka, Honeywell, Morristown, USA), was injected 7 days before euthanasia, and the second fluorophore, calcein (2 wt % in 2 wt % NaHCO3, 20 mg/kg; Fluka), was injected 3 days before euthanasia of the animals. Both fluorophores were injected intraperitoneally. All animals were euthanized at the 12-week time point, femora were explanted, cut, embedded in Technovit 9100, grinded to a thickness of 50 to 100 μm, and imaged using a Keyence BIOREVO BZ-9000 microscope (Keyence, Osaka, Japan; alizarin: tetramethyl rhodamine isothiocyanate filter, excitation: 545/25, emission: 605/70; calcein: green fluorescent protein filter, excitation: 470/40, emission: 525/50).
+ Open protocol
+ Expand
2

Evaluating Cell Viability after Photoirradiation

Check if the same lab product or an alternative is used in the 5 most similar protocols
To assess cell viability after photoirradiation, irradiated and non-irradiated BV2 cells were stained with 1 μM Calcein AM (Invitrogen) in PBS for 15 min at 37°C. Cells were then examined by fluorescence microscopy (Keyence Corp., Osaka, Japan) and the percentage of green, Calcein+ BV2 cells (live cells) of total methyl-di-iodo BODIPY+ cells (red, lipid droplet containing cells) was calculated.
+ Open protocol
+ Expand
3

Evaluating Cell Viability after Photoirradiation

Check if the same lab product or an alternative is used in the 5 most similar protocols
To assess cell viability after photoirradiation, irradiated and non-irradiated BV2 cells were stained with 1 μM Calcein AM (Invitrogen) in PBS for 15 min at 37°C. Cells were then examined by fluorescence microscopy (Keyence Corp., Osaka, Japan) and the percentage of green, Calcein+ BV2 cells (live cells) of total methyl-di-iodo BODIPY+ cells (red, lipid droplet containing cells) was calculated.
+ Open protocol
+ Expand
4

Calcein-based Bone Mineralization Measurement

Check if the same lab product or an alternative is used in the 5 most similar protocols
calcein injection method was conducted for the MAR measurement. calcein is a fluorescent dye that binds to and labels newly mineralized bone, indicating mineral apposition between the 2 calcein injection time points (Castro et al., 2019 (link); Tompkins et al., 2023a (link)). Briefly, one bird from each pen was injected subcutaneously with 20 mg/Kg of calcein (Sigma Aldrich, St. Louis, MO) solution based on body weight at 3 DPI (d 17) and 7 DPI (d 21). At 10 DPI (d 24), the birds were euthanized, and the right tibias were removed, cleaned from the adherent tissue, and fixed in 70% ethanol. For analysis, a bone section of approximately 0.5 mm was cut from the mid-diaphysis using a circular saw (Ryobi, Anderson, SC). The slides were then examined under a compound microscope (BZ-Z800, Keyence Inc., Itasca, IL), and images were taken at 4× magnification using a fluorescent light (BZ-Z800, Keyence Inc., Itasca, IL). The distance between the 2 calcein labels was measured using BZ-800 Analyzer (BZ-Z800, Keyence Inc., Itasca, IL).
+ Open protocol
+ Expand
5

Measuring iPSC Viability with Calcein-AM

Check if the same lab product or an alternative is used in the 5 most similar protocols
The iPSCs were dissociated and plated on Matrigel (human embryonic stem cell-qualified Matrigel, BD, USA) coated 96-well plates at 20,000 cells per well in 100 μl of the Nutristem medium containing 10 μM Y-27632 (Nacalai Tesque). On day 1, an additional 100 μl of the Nutristem medium with the drug(s) was added to each well. On day 2, 100 μl of the Nutristem medium with 4 μg/ml calcein-AM (Dojindo, Japan) was added to each well, and the plate was incubated for 30 min at 37 °C. The cells stained with calcein were imaged by a fluorescence microscope (BZ-X800, KEYENCE, Japan). After thresholding the images, the stained cell areas were calculated by using Image J (https://imagej.nih.gov/ij/index.html, NIH, USA). 2-Deoxy-d-glucose (2DG, Sigma), JX 06 (Tocris, USA), sodium dichloroacetate (DCA, Sigma), 2, 2-dichloroacetophenone (DAP, Sigma), and taurine (Sigma) were added to the culture medium when needed.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!