The largest database of trusted experimental protocols

36 protocols using anti cd45 apc

1

In Vitro T Cell Activation Assay

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-mouse CD3 (clone 145-2C11) and anti-CD28 (clone 37.51) antibodies were prepared in our laboratory. DMEM, penicillin and streptomycin from GIBCO Inc. (Grand Island, NY, USA); fetal bovine serum (FBS) from HyClone Inc. (Logan, UT, USA); anti-mouse antibodies including FITC anti-CD3, -IFNγ and -granzyme B, PE anti-CD4, -CD19 and -perforin, PE-Cy5 anti-CD8 and APC anti-CD45.2 antibodies from eBioscience (San Diego, CA, USA); PE anti-TNFα and -CD103 antibodies from BioLegend (San Diego, CA, USA); STZ, Mitomycin C, LPS, MTT, phorbol myristic acid (PMA), Ionomycin and Brefeldin A from Sigma (St. Louis, MO, USA); CFSE from Molecular Probes (Eugene, OR, USA); QL9 (QLSPFPFDL) and KM9 (KAVTNFATM) peptides from AnaSpec, Inc. (San Jose, CA, USA) were purchased.
+ Open protocol
+ Expand
2

Murine T Cell Activation and Characterization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Anti-mouse CD3 (clone 145-2C11) and anti-CD28 (clone PV-1) antibodies were prepared in our laboratory. DMEM, penicillin and streptomycin from GIBCO Inc. (Grand Island, NY, USA); fetal bovine serum (FBS) from HyClone Inc. (Logan, UT, USA); anti-mouse antibodies including Alexa 488 anti-Foxp3, -IFNγ and -perforin, PE anti-CD25, -CD39, -CD101, -CTLA-4, -granzyme B, ICOS and -IL-2, PerCP-Cy5.5 anti-CD73 and APC anti-CD45.2, FITC anti-human CD8, PE anti-human CD28, APC anti-human CD39 and PE-Cy7 anti-human CD73 from eBioscience (San Diego, CA, USA); PE anti-TNFα, -CCR6, -CD103, -Galectin-9 and -Helios antibodies from BioLegend (San Diego, CA, USA); PE anti-CD122, -CTLA-4, -LAG3 and -PD-1, APC anti-FR4, and PE-Cy7 anti-GITR antibodies from BD Bioscience (San Jose, CA, USA); Anti-CD73 antibody from Abcam (Cambridge, MA, USA); Mitomycin C, LPS, MTT, α, β-methylene adenosine 5’-diphosphate (AMPCP) from Sigma (St. Louis, MO, USA); KC7F2 from Calbiochem (Burlington, MA, USA); ZM241385 and MRS1754 from Tocris (Minneapolis, MN, USA); CFSE from Molecular Probes (Eugene, OR, USA); M2 peptides (LCMV gp33-41, KAVYNFATM) from AnaSpec, Inc. (San Jose, CA, USA); LY294002 from Cell signaling Technology (Danvers, MA, USA) were purchased.
+ Open protocol
+ Expand
3

Multiparametric Analysis of T Cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
Blood samples were collected in 50 U/ml heparin (Sigma Aldrich, Inc.), and ACK (Ammonium-Chloride-Potassium) lysis buffer before FACS analysis. The following antibodies were used: FITC-anti-KLRG1, APC-anti-CD45.1, PECy7-anti-CD127, Pacific Blue-anti-CD122, PerCP-Cy 5.5-anti-EOMES, PECy7-anti-IFN-γ (eBiosciences Inc.), PE-anti-CD62L, PE-anti-Thy1a, APC-Cy7-anti-CD45.2, Alexa-Fluor-700-anti-CD62L, Horizon-V500-anti-CD44, PE-anti-TNFα, APC-anti-T-bet, PE-CF594-CD8α, ACP-Cy7-TCRVα2 and AlexaFluor700-anti-Ki67 (BD Biosciences, Inc.), ECD-Texas Red-anti-CD8α (Invitrogen, Inc.), Fc Block, FITC-CD45.2, and AF700-CD45.2 (Biolegend). MFI was determined by gating on cytokine positive populations. All transferred cells analyzed were gated by CD8+ and CD45.2+, CD45.1+ or Thy1.2+ markers.
+ Open protocol
+ Expand
4

Splenic and Lymph Node Immune Cell Profiling

Check if the same lab product or an alternative is used in the 5 most similar protocols
Single-cell suspension of splenic or lymph node cells were incubated with 10% 2.4G2 culture supernatants to block Fc receptors and then stained with indicated antibodies in MACS buffer (PBS supplemented with 1% FBS and 5mM EDTA). Staining reagents include: APC-Cy7 anti-CD19 (1D3), APC-Cy7 anti-B220 (RA3-6B2), AF700 anti-CD4 (RM 4-5), APC anti-CD4 (GK1.5), FITC anti-CD4 (gk1.5), AF700 anti-CD44 (IM7), APC anti-CD45.1 (A20), eF450 anti-CD45.2 (104), PE-Cy7 anti-CD95 (Jo2), eFlour450 anti-GL7 (GL7), PE-Cy7 anti-PD-1 (RMP1-30), PE anti-IgMa (DS-1), FITC anti-IgD (11-26c) from eBioscience; biotinylated anti-CXCR5 (2G8), PE anti-CD40L (MR1), streptavidin PE (Cat 554061) and streptavidin APC (Cat 554067) from BD Biosciences. Dead-cell exclusion was based on 7-AAD staining (Biotium), and non-singlet events were excluded with FSC-H/FSC-W and SSC-H/SSC-W. Isotype-matched non-specific antibodies were purchased from the corresponding companies. Cells were stained with primary antibodies for 60-90 min, washed, and then with secondary reagents for 30 min on ice. For intracellular staining, cells were stained using Cytoperm/Cytofix kit (BD Biosciences) according to the manufacturer’s protocol. All flow-cytometry data were collected on an LSR-II or Aria III (BD).
+ Open protocol
+ Expand
5

Isolation and Identification of Murine Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were stained in the dark on ice for 15 min with flow cytometry antibodies. Cells were then washed once with 1× PBS and resuspended in 1× PBS for sorting as described previously11 (link)–13 (link),73 (link). Antibodies used in this study were: PE anti-mouse CD45R/B220 (BD Biosciences, #553089, 1:100), PE anti-mouse TER-119 (Biolegend, #116207, 1:100), PE anti-O4 (R&D Systems, #FAB1326P, 1:100), PE anti-CD105 (eBioscience, #12–1051-82, 1:100), PE anti-CD140a (eBioscience, #12–1401-81, 1:100), PE anti-Ly-6G (Biolegend, #127608, 1:100), PerCP anti-Ly-6C (Biolegend, #128028, 1:100), APC anti-CD45 (eBioscience, #17–0451-83, 1:100), APC-Cy7 anti-CD11c (BD Biosciences, #561241, 1:100), and FITC anti-CD11b (eBioscience, #11–0112-85, 1:100). All cells were gated on the following parameters: CD105negCD140anegO4negTer119negLy-6GnegCD45Rneg. Astrocytes were subsequently gated on: CD11bnegCD45negLy-6CnegCD11cneg. Microglia were subsequently gated on: CD11bhighCD45lowLy-6Clow. Pro-inflammatory monocytes were subsequently gated on: CD11bhighCD45highLy-6Chigh. Compensation was performed on single-stained samples of cells and an unstained control. Cells were sorted on a FACS Aria IIu (BD Biosciences). For sorting of TdTomato+ astrocytes, cells were sorted according to TdTomato fluorescence judged against a wild-type control animal using a yellow-green laser on a FACS Aria IIu.
+ Open protocol
+ Expand
6

Multipotent Cell Phenotyping in Bone Marrow

Check if the same lab product or an alternative is used in the 5 most similar protocols
Bone marrow (BM) cells were flushed out from tibiae and femurs with PBS. Red blood cells were lysed using lysis buffer (ThermoFisher Scientific A1049201). After washing with PBS, cells were suspended in PBS with 2% FBS. Cells were stained with various fluorescein-labeled antibodies (Abs) and subjected to flow cytometric analysis using Becton-Dickinson FACSCanto II Cytometer [20 ]. APC-anti-CD45, PE-anti-CD105, PE-cy7-anti-Sca-1, PE-anti-CD11b, PE-cy5-anti-Gr1, PE-anti-CD3, PE-anti-B220 Abs and anti-αSMA were purchased from eBioscience. PE-anti-Goat, APC-anti-Rabbit, PE-anti-mouse anti-PDGFRβ Abs were purchased from Santa Cruz Biotechnology. Anti-LeptinR Ab was purchased from Abcam. Results were analyzed by Flowjo7 data analysis software (Ashland, OR). For cell sorting, cells were stained with APC-anti-CD45 Ab and CD45−GFP+ cells were sorted by Becton-Dickinson FACSAria III sorter [20 ].
+ Open protocol
+ Expand
7

Flow Cytometry Antibody Staining Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
The following antibodies were used for FACS: FITC-anti-CD11b (11–0112), APC-anti-CD11b (17–0112), PE-anti-F4/80 (12–4801), FITC-anti-F4/80 (11–4801), APC-anti-CD45 (17–0451), PerCp-Cy5.5-anti-CD45 (45–0451), FITC-anti-CD24 (11–0242), APC-anti-CD24 (17–0242), PerCP-Cy5.5-anti-NK1.1 (45–5941), PE-anti-CD4 (12–0041), FITC-CD3e (11–0031), PerCP-Cy5.5-Gr1 (45–5931), and PE-anti-Ly6C (12–5932) obtained from eBioScience, and PE Annexin V Apoptosis Detection Kit I (559763) from BD Pharmingen. Cells were blocked for 15 min with Fc blocking reagent on ice prior to labeled with fluorescent-conjugated antibodies diluted in FACS buffer. Cells for phenotypic analyses were stained using the indicated fluorescent-conjugated antibody for 30 min on ice. Appropriate isotype controls were used in all case. Flow cytometry was performed using a FACSCalibur (BD Bioscience, San Jose, CA) and the data were analyzed with FlowJo software (TreeStar, Ashland, OR).
+ Open protocol
+ Expand
8

Immunophenotyping of Regulatory T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole blood was used for membrane staining and one-step density gradient centrifugation (Lymphoprep: d = 1.077 g/mL; Nycomed Pharma AS, Oslo, Norway) was used for intracellular FoxP3 labeling in isolated mononuclear cell fractions. Flow cytometry was performed using a FACSCalibur flow cytometer (Becton Dickinson, San Jose, CA, USA) with CellQuest Pro software (Becton Dickinson) to acquire cells. The following monoclonal antibodies (Mo-Abs) were used for cell surface and intracellular staining after permeabilization: PerCP-anti-CD4, FITC-conjugated anti-CD25, APC-anti-CD45, and PE-conjugated anti-FOXP3 (eBioscience, San Diego, CA, USA).
Phenotypic analyses were performed using WinMDI software. Generally, 20,000 cells were acquired. Lymphocytes were analyzed in the gated population, which lacked cells with granulocyte or monocyte characteristics (CD45high, SSC low). In 16 patients, the proportion of CD4+CD25high lymphocytes correlated with the proportion of FoxP3 + CD4+ lymphocytes (R = 0.551, p = 0.028).
+ Open protocol
+ Expand
9

Multicolor Flow Cytometry Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
APC-anti-CD45, PE-anti-CD105 and PE-cy7-anti-Sca1 antibodies (Abs) are purchased from eBioscience. Callus and BM cells are stained with various fluorescein-labeled Abs and subjected to flow cytometric analysis using a Becton-Dickinson FACSCanto II Cytometer, according to the manufacturer’s instructions. Results are analyzed by Flowjo7 data analysis software (FLOWJO, LLC Ashland, OR). For cell sorting, BM cells from Nestin-GFP mice are sorted using a Becton-Dickinson FACSAria III sorter, according to the manufacture’s instructions [29 ].
+ Open protocol
+ Expand
10

Flow Cytometric Analysis of Immune Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells were stained in the dark on ice for 15 minutes with flow cytometry antibodies. Cells were then washed once with 1X PBS and resuspended in 1X PBS for sorting as described previously (Mayo et al., 2014 ; Rothhammer et al., 2016 ). Antibodies used in this study were: PE anti-mouse CD45R/B220 (#553089, BD Biosciences, 1:100), PE anti-mouse TER-119 (#116207, Biolegend, 1:100), PE anti-O4 (#FAB1326P, R&D Systems, 1:100), PE anti-CD105 (#12–1051-82, eBioscience, 1:100), PE anti-CD140a (#12–1401-81, eBioscience, 1:100), PE anti-Ly-6G (#127608, Biolegend, 1:100), PerCP anti-Ly-6C (#128028, Biolegend, 1:100), APC anti-CD45 (#17–0451-83, eBioscience, 1:100), APC-Cy7 anti-CD11c (#561241, BD Biosciences, 1:100), and PE-Cy7 or FITC anti-CD11b (#25–0112-82, #11–0112-85, eBioscience, 1:100). All cells were gated on the following parameters: CD105negCD140anegO4negTer119negLy-6GnegCD45Rneg. Astrocytes were subsequently gated on: CD11bnegCD45negLy-6CnegCD11cneg. Microglia were subsequently gated on: CD11bhighCD45lowLy-6Clow. Pro-inflammatory monocytes were subsequently gated on: CD11bhighCD45highLy-6Chigh. Compensation was performed on single-stained samples of cells and an unstained control.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!