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28 protocols using s 2238

1

Anticoagulant Activity Assessment of Sulfated Polymers

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Anti-Xa
and anti-IIa assays
were performed in human PPP. For the anti-Xa assay, a Coatest Heparin
assay kit (Chromogenix) was obtained and performed via the manufacturer’s
recommendations adapted for a 96-well plate. Again, 1/10 volume sulfated
polymers were spiked into the plasma prior to determination of the
anti-Xa activity. For the anti-IIa assay, S-2238 (Chromogenix), human
thrombin, and human antithrombin (Enzyme Research Laboratories) were
utilized. The anti-IIa assay was adapted for a 96-well plate from
the Chromogenix protocol for S-2238. The sulfated polymers were spiked
into the plasma prior to initiation of the assay. To determine the
ATIII dependence of the sulfated polymers, the anti-IIa assay was
repeated with ATIII depleted human plasma (Affinity Biologicals) and
omitted addition of exogenous ATIII. For all assays, pharmaceutical
grade heparin (APP Pharmaceuticals) was used for the standard curves.
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2

Lectin Pathway Activation Prothrombin Cleavage

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Cleavage of prothrombin by C activated through the lectin pathway was assessed by coating the plates with 200 μg/ml mannan (Sigma-Aldrich) in 0.1 M bicarbonate buffer pH 8.8 overnight at +4°C. The free binding sites were blocked with PBS containing 2% BSA and the bound mannan was then incubated with 1/50 C1q-deficient serum in VBS for 2 hr at 37°C. After washing with VBS, a mixture of 694 nM prothrombin (Haematologic Technologies, VT, USA) and the substrate S-2238 (Chromogenix) in 0,5 mM Tris buffered saline pH 8,5 containing 20 mM CaCl2 was added and incubated at 37°C. The reaction was read at 405nm. A similar approach was used to evaluate thrombin generation by C activated through the lectin pathway by the MBL/β2-GPI complex assembled on HUVEC and incubated with 1/10 C1q-deficient serum, with or without MBL (1μg/ml). Thrombin formation was evaluated by adding prothrombin and the S-2238 substrate in Human Endothelial serum-free medium (GE Healthcare) at pH 7.4.
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3

Thrombin Formation Assay with eryMPs

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The ability of eryMPs to support formation of thrombin in the PTase reaction was measured as described [29] (link). The final concentrations in the assay were 0.5 µM prothrombin, 5 nM hFXa, 40 pM FVa, 3 mM CaCl2 and 0–6×106 eryMPs/mL. The thrombin formed was measured kinetically with chromogenic substrate (S-2238, Chromogenix) in Infinite 200 microplate reader (Tecan). Data were collected every 30 s for 15 minutes. Human thrombin of known concentrations were used to obtain a calibration curve for the conversion of the substrate.
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4

Silica Nanoparticle-Mediated FXII Activation Assay

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The chromogenic substrate S-2238 was purchased from Chromogenix (Milano, Italy). Normal control human plasma “Plasma Control N” was obtained from Siemens Healthcare (Malvern, PA). Phosphatidyl-L-serine was purchased from MP Biomedicals. 4 nm silica nanoparticles dispersion was obtained from Alfa Aesar (Ward Hill, MA). Silica nanoparticle dispersion of 7 nm (Ludox SM), 12 nm (Ludox HS), and 22 nm (Ludox TM) were purchased from Sigma-Aldrich. 50 nm (NexSil 85-40) and 85 nm (NexSil 125-40) silica nanoparticle dispersions were purchased from Nyacol Nano Technologies, Inc. (Ashland, MA). MPC polymer (poly(2-methacryloyloxyethyl phosphorylcholine) (Lipidure-CM5206) and MPC polymer coated 96 well plate “Lipidure-Coat A-F96” was purchased from NOF Corporation (Tokyo, Japan). FXII was purchased from Haematologic Technologies Inc. (Essex Junction, VA) and used as received.
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5

Quantification of Flavonoids and Polyphenols

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Chromogenic substrate S-2238 was purchased from Chromogenix (Milan, Italy); bovine thrombin and argatroban were purchased from Sigma-Aldrich (St. Louis, MO, USA). The phosphate buffer saline (PBS) (pH 7.2-7.4, 0.01 M) and dimethyl sulfoxide (DMSO) were purchased from Solarbio (Beijing, China). Standard substance of galangin, kaempferol, astragaline, fisetin, quercetin, quercitrin, isoquercitrin, rutin, isorhamnetin, isorhamnetin-3-O-neohespeidoside, typhaneoside, myricetin, myricitrin, baicalein, baicalin, wogonin, wogonoside, hispidulin, scutellarein, genkwanin, hydroxygenkwanin, luteolin, luteoloside, 6-methoxyluteolin, dihydroquercetin, dihydromyricetin, naringenin, naringin, narirutin, hesperetin, hesperidin, neohesperidin, L-epicatechin, (-)-epigallocatechin, (-)-epicatechin gallate, proanthocyanidin B1 with 98% purity on the basis of HPLC analysis were obtained from Chengdu Herbpurify Co., Ltd. (Chengdu, China). Herbacetin and morin were obtained from Chengdu Must Bio-Technology Co., Ltd. (Chengdu, China). chrysin, apigenin, diosmetin and kaempferol-7-O-β-d-glucopyranoside were purchased from Chengdu Desite Bio-Technology Co., Ltd. (Chengdu, China).
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6

Sulfated Glycans Inhibit Coagulation Factors

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Sulfated glycans were assayed for their serpin-mediated inhibitory activity against IIa and Xa using effective concentrations of 10 nM of AT (# HCATIII-0120, Haematologic Technologies) or 25 nM HCII (# HCII-0190, Haematologic Technologies), 2 nM of IIa (# HCT-0020, Haematologic Technologies) or factor Xa (# HCXA-0060, Haematologic Technologies), and 0 to 100 μg/ml of sulfated glycans in 100 μl of TS/PEG buffer (20 mM Tris–HCl, 0.15 M NaCl, and 1.0 mg/ml PEG 8000, pH 7.4) as reported earlier (77 ). Sulfated glycans (10 μl) at varying concentrations were dispensed into a 96-well microtiter plate, followed by the addition of 40 μl AT (25 nM) or HCII (25 nM). A 50 μl aliquot of IIa (4 nM) or Xa (4 nM) was added last to initiate the reaction. The plate was then immediately incubated at 37 °C for 1 min. This was followed by the addition of 25 μl of chromogenic substrate S-2238 (# S820324, Chromogenix) for IIa or CS–11 (32 (link)) (# 229011, Hyphen-BioMed) for factor Xa. Absorbances were then measured at 405 nm for 300 s at an interval of 15 s. Wells without sulfated glycans served as controls and IIa/Xa activity in the control was considered 100%. Residual activity in treated wells was calculated relative to that observed in control wells. Heparin (180 IU/mg) was used in all assays as a positive control.
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7

Amidolytic Activity of Heparins

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The heparins were subject of amidolytic activity assessments of thrombin (FIIa) or factor Xa (FXa) by measuring the hydrolysis of chromogenic substrates as previously described10 (link)11 (link). Incubations were performed in 96-well plates with 10 nM antithrombin, 2.0 nM FXa or thrombin (all from Hematologic Technologies; Essex Junction, USA) and 0 to 2 μg mL−1 heparins (dry weight) in TS/PEG buffer (0.02 M Tris/HCl, 0.15 M NaCl and 1.0 mg mL−1 polyethylene glycol 8,000, pH 7.4). FXa or FIIa were added lastly to trigger the reaction. After incubation for 60 s at 37 °C, residual FXa or FIIa activities were determined by the addition of 100 μM of chromogenic substrates S-2765 or S-2238, respectively (both from Chromogenix; Molndal, Sweden). Absorbance (405 nm) was recorded for 300 s in a Thermomax Microplate Reader (American Devices; Sunnyvile, California). Anti-FXa and anti-FIIa activities were obtained by parallel line assays against the 6th International Heparin Standard (NIBSC) using SoftMax Pro5.4.1 software (American Devices; Sunnyvile, California) and validated methods recommended by the pharmacopeias. When the results obtained with HB-I were adjusted to IU mL−1 in the assays, they generate coincident curves with the 6th International Heparin Standard (NIBSC).
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8

Thrombin Formation Assay with AgNP/AgMP

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After incubation with AgNP or AgMP for 4 h, samples were incubated with 5 nM factor Xa and 10 nM factor Va in Tyrode buffer (134 mM NaCl, 10 mM HEPES, 5 mM glucose, 2.9 mM KCl, 1 mM MgCl2, 12 mM NaHCO3, 0.34 mM Na2HPO4, 0.3% BSA, and 2 mM CaCl2 at pH 7.4) for 3 min at 37 °C. Thrombin formation was initiated by addition of 2 μM prothrombin. Exactly 3 min after the addition of prothrombin, an aliquot of the suspension was transferred to a tube containing stop buffer (50 mM Tris-HCl, 120 mM NaCl, and 2 mM EDTA at pH 7.9). Thrombin activity was determined using the chromogenic substrate S2238 (chromogenic substrate for thrombin; Chromogenix, Milano, Italy). We calculated the rate of thrombin formation from the change in absorbance at 405 nm using a calibration curve generated with active-site–titrated thrombin.
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9

Chromogenic Assay for FXa and Thrombin Modulation

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The modulation of FXa and thrombin activity was evaluated by colorimetric assay.
Briefly, CTX (0.5-13.5 µg/mL) or PBS (control) was incubated with 43 mU/mL of
human FXa or thrombin (Sigma-Aldrich, St. Louis, USA) for 10 minutes.
Afterwards, specific chromogenic substrate S-2222 or S-2238 (400 µM,
Chromogenix, Milan, Italy), were added and the hydrolysis of chromogenic
substrate by FXa or thrombin was measured at 405 nm using a Spectramax 190
microplate reader (Molecular Devices, San Jose, USA). The reaction was carried
out in a 96-well plate at 25ºC in PBS, pH 7.4. The enzymatic activity was
calculated based on the slope of the activity curve, obtained from sequential
readings at 405 nm, and considered the values generated by the incubation of the
factors and PBS (control) to be 100% activity.
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10

Quantifying Prothrombin Activation by Prothrombinase

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Prothrombinase assays were performed essentially as described previously.12, 20, 34 Prothrombin activation was initiated by addition of 0‐600 nmol/L prothrombin to a mixture of 8pM FVa, 5 nmol/L FXa, in the presence of 0‐50 μmol/L phospholipids (DOPC/DOPS; 90:10) and 2 mmol/L CaCl2 in 25 mmol/L Tris (pH 7.4), 150 mmol/L NaCl containing 0.5 mg/mL ovalbumin.34To quantify the remaining FVa activity after APC‐mediated inactivation, assays were performed using 500 nmol/L prothrombin. Due to the reduced cofactor function of FVaNara, 16 pmol/L was used.
Reactions were allowed to proceed for 2 minutes at 37°C and then stopped by dilution into TBS, 20 mmol/L EDTA, 1% PEG 6000. Prothrombin activation was quantified by cleavage of S‐2238 (Chromogenix) and comparison to a thrombin standard curve.21
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