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24 protocols using igg2a

1

MHC Class II and HLA-G Expression

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To analyze the expression levels of MHC class II antigens (HLA-DR, BioLegend, Cat# 307603, RRID:AB_314681 and HLA-DQ, BioLegend, Cat#318104, RRID:AB_604128) and HLA-G (BioLegend, Cat# 335909, RRID:AB_10900805), ARPE19 cells (ATCC, RRID:CVCL_0145), human umbilical cord mesenchymal stem cells (hUMSCs, Cat# SHTBA0009C1BAC23 obtained from iCell Biological Technology Co., Ltd), hAESCs, hAESCs-RPE like cells were collected after incubation with 10 ng mL–1 IFN-γ (Peprotech, Cat# 300-02-100) for 72 h. Cells were stained with FITC-anti-HLA-DR (isotype control was IgG2a, BioLegend, Cat# 400207, RRID:AB_2884007), FITC-anti-HLA-DQ (isotype control was IgG1, BioLegend, Cat# 400109, RRID:AB_2861401) and APC-anti-HLA-G (isotype control was IgG2a, BioLegend, Cat# 400220, RRID:AB_326468) according to the manufacturer’s instructions, and then they were analyzed by flow cytometry (FACSCalibur; BD Biosciences, Franklin Lakes, NJ). Analyses were performed on five biological replicates.
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2

Immunophenotyping of Stem Cells

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To analyze the expression levels of MHC class II antigens (HLA–DR, BioLegend, San Diego, CA, USA, Cat# 307603, RRID:AB_314681 and HLA–DQ, BioLegend, Cat#318104, RRID:AB_604128) and HLA–G (BioLegend, Cat# 335909, RRID:AB_10900805), human umbilical cord mesenchymal stem cells (hUMSCs, Cat# SHTBA0009C1BAC23 obtained from iCell Biological Technology Co., Ltd., Shanghai, China), hAESCs, and hAESCs–PR–like cells were collected after incubation with 10 ng mL−1 IFN–γ (Peprotech, East Windsor, NJ, USA, Cat# 300–02–100) for 72 h. The cells were stained with FITC–anti–HLA–DR (isotype control was IgG2a, BioLegend, Cat# 400207, RRID:AB_2884007), FITC–anti–HLA–DQ (isotype control was IgG1, BioLegend, Cat# 400109, RRID:AB_2861401), and APC–anti–HLA–G (isotype control was IgG2a, BioLegend, Cat# 400220, RRID:AB_326468) according to the manufacturer’s instructions, and then they were analyzed by flow cytometry (FACSCalibur; BD Biosciences, Franklin Lakes, NJ, USA). Analyses were performed using three biological replicates.
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3

Antibody-based Detection of Proliferating Cells

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The antibodies used were as follows: mAb14 (PINK Biopharma, Ness Ziona, Israel) anti-csPCNA at 400 ng/105 cells (unless otherwise noted) combined with streptavidin-APC (Miltenyi Biotec, Woking, UK) at 1–2 µg/mL and biotinylated anti-mouse IgG1ĸ (1:50) (BioLegend, San Diego, CA, USA) for isotype control; PC10 (BioLegend, San Diego, CA, USA) anti-nuclear PCNA (nPCNA) at 1 µg/mL (unless otherwise noted) combined with Alexa Fluor 488 conjugated goat anti-mouse IgG at 1 µg/mL (Jackson ImmunoResearch, West Grove, PA, USA) and its matched isotype control (IgG2a) (BioLegend, San Diego, CA, USA).
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4

Inhibiting VEGFR-2 and Neutralizing VEGF-A in C. difficile Infection

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To inhibit VEGFR-2, mice were treated with daily intraperitoneal injections of 100μl SU1498 (30 mg/kg in dimethyl sulfoxide, Sigma Aldrich, Inc.) or dimethyl sulfoxide alone starting on the day of C. difficile gavage and continuing daily for 3 days49 (link). To neutralize VEGF-A, mice were treated with intraperitoneal injection of 250 μg rat anti-mouse VEGF-A antibody (2G11–2A05) or the isotype control IgG2a (each at 12.5 mg/kg, Biolegend, Inc.)50 (link) at 12 and 36 hours after C. difficile challenge. To stabilize HIF-1α prolyl hydroxylase, mice were treated with intraperitoneal injections of 100μl DMOG (400mg/kg in saline, Cayman Chemical) starting on the day of C. difficile gavage for 2 days.
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5

Immunostaining of Dystrophin and α-Actinin in Myotubes

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Cells were seeded at 40,000 cells per well on gelatin-coated 12-mm sterile glass coverslips in 24-well plates. Cells were grown according to the previously explained protocol. During all the procedures, cells were kept at room temperature unless specified otherwise. After myotube formation, cells were fixed with acetone.23 (link) Primary antibodies were incubated overnight at 4°C: dystrophin NCL-1, NCL-2, or NCL-3 (Leica, Buffalo Grove, IL, USA) at a dilution of 1:100 and alpha actinin (Sigma, St. Louis, MO, USA) at a dilution of 1/250. Immunoglobulin G (IgG) controls were also used: IgG1, ref 554121 (BD Biosciences, San Jose, CA, USA), and IgG2A, ref 400202 (BioLegend, San Diego, CA, USA).
Secondary antibodies were used at a dilution of 1:500 (goat anti-mouse IgG [SA5-10173] and goat anti-rabbit [35553]) from Thermo Fisher Scientific for 1 h. Coverslips were mounted in ProLong gold antifade with DAPI (Thermo Fisher Scientific). Images for were acquired on a Zeiss AxioImager Z1 microscope and with the AxioVision rel. 4.6.3.0 acquisition software.
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6

Immune cell antibody staining

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Mouse antibodies (Abs) and isotype control Abs (IgG1, IgG2a, and IgG2b), anti-CD3 (17A2), CD4 (GK1.5), CD8α (53–6.7), tumor necrosis factor (TNF)-α (MP6-XT22), perforin (S16009A), CD11c (N418), CD40 (3/23), CD80 (16-10A1), CD86 (GL-1), anti-interferon (IFN)-γ (B27), MHC class I (H2Kd, 28-8-6), and MHC class II (I-A/I-E, M5/114.15.2) were purchased from BioLegend (San Diego, CA, USA).
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7

Quantifying Kidney Histopathology and Immunofluorescence

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Kidney sections were fixed in 10% neutral buffered formalin, paraffin-embedded and stained with haematoxylin and eosin, and periodic acid-Schiff, and were examined by Leica light microscope. Histologic features including glomerular inflammation, proliferation, crescent formation, necrosis, inflammatory infiltrate, tubular necrosis, and glomerulosclerosis were graded semi-quantitatively by a blinded observer (KW Chan) where 0 represents no damage to 4 – severe, and were summed up to a composite score [26] (link). Immunofluorescent staining with FITC-conjugated anti-mouse C3 (Abcam, USA) and IgG2a (BioLegend) was performed on frozen kidney sections. Images on at least 20 glomeruli at random positions were captured by fluorescence microscopy (Nikon, USA) and analysed by the ImageJ software. Fluorescence intensity is expressed as integrated density corrected by the area selected multiplied by mean fluorescence of background readings.
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8

Quantification of Antigen-Specific Antibody Responses

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Sera collected from SAMR1 and SAMP8 mice were analyzed as described previously.49 (link) Standard curves for each Ig isotype were generated using purified myeloma proteins or antibodies: IgM (clone G155-228, BD Biosciences), IgG1 (clone 4.19, in-house),50 (link) IgG2a (clone PK136, in-house), IgG2b (clone Y.3, in-house), IgG3 (clone MG3-3S, Biolegend, San Diego, CA, USA). The Ig concentrations were calculated by using the Graph Pad Prism 5.0 software. After in vivo peptide-OVA immunization, anti-peptide-specific IgG titers in sera were determined by indirect ELISA in Nunc 96-microplate wells (Maxi Sorp, 442404, Nunc-Thermo Fisher Scientific). Plates were coated (1 h, 37 °C) with 50 μl of peptide (10 μg/ml PBS); plates were then washed, blocked, incubated with sera (twofold serially diluted in PBS-Tween20/BSA, starting from 1:10), and revealed with goat anti-mouse IgGs (SouthernBiotech, Birmingham, AL, USA), as described.49 (link) The 18-amino-acid peptide is part of the sequence of the H toxin of S. aureus. Coupling agent: Sulfo-SMCC (succinimidyl 4-(N-maleimidomethyl)cyclohexane-1-carboxylate).
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9

Quantification of OVA-Specific Antibodies

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Microtiter plates (MaxiSorb®, Costar, USA) were coated with 50 μl of 5 μg/ml OVA solution in PBS (pH = 7.2) and incubated overnight at + 4 °C. Following extensive washing with PBS containing 0.05% Tween-20 (PBS-T) and subsequent blocking with 5% BSA in PBS, plates were incubated with serially diluted serum samples at + 4 °C overnight. Next day plates were subsequently exposed to primary biotin-labeled anti-mouse antibodies (BioLegend, San Diego, CA, USA) to either IgEa (clone UH297) or IgG1 (clone RMG1 1) or IgG2a (clone RMG2a 62), and streptavidin-conjugated HRP. Plates were further processed with substrate solution (3,3,5,5-tetramethylbenzidine) Optical densities (OD) were measured with automatic 96-well plate reader (Thermo Fisher Scientific, Waltham, MA, USA) at 450 nm with subtraction of optical density at 620 nm that does not correspond to the reaction colored product. Antibody quantities were estimated as OVA-specific antibody titers defined as the serum dilution, in accordance according to 4-PL regression analysis.
For estimation of total IgE levels, plates were coated with unlabeled anti-mouse IgE (clone RME1, BioLegend). Serum samples were added in 1:100 dilution in duplicates with different dilutions of mouse IgE κ (MEA-36, BioLegend). In following steps biotin labeled anti-mouse IgE (UH297) and streptavidin-HRP were added subsequently as described above.
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10

Zymosan-Induced Inflammatory Pain Model

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Male C57BL/6N mice (6–8 weeks) were purchased from Janvier (Le Genest, France) and treated according to the International Association for the Study of Pain guidelines. For all experiments the ethics guidelines for investigations in conscious animals were obeyed and the procedures were approved by the local ethics committee (Regierungspräsidium Darmstadt). The animals had free access to food and water and were maintained in climate‐ (23 ± 0.5°C) and light‐controlled rooms (light from 6.00 a.m. to 6.00 p.m.).
Inflammation was induced by injection of 10 μl zymosan (3 mg/ml in PBS; Merck, Darmstadt, Germany) subcutaneously into the plantar side of one hind paw. Eosinophil depletion was achieved by intraperitoneal (i.p.) injection of anti‐Siglec F antibody (0.883 mg/kg; clone 238,047; R&D Systems, Minneapolis, MN) 24 h prior zymosan injection. As control purified rat IgG2a (Biolegend, San Diego, USA) was used. IL‐4c was prepared using IL‐4 (Peprotech, Hamburg, Germany) and anti‐IL4 antibody (Biolegend, San Diego, USA) (Finkelman et al, 1993 (link); Milner et al, 2010 (link); Jenkins et al, 2011 (link)) and administered i.p. (0.166 mg/kg IL‐4 and 0.883 mg/kg anti‐IL4 antibody) 24 h prior zymosan injection. (Finkelman et al, 1993 (link); Milner et al, 2010 (link); Jenkins et al, 2011 (link)).
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