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11 protocols using immunohistochemistry kit

1

Immunohistochemical Staining Assay Protocol

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Immunohistochemical staining assay was performed by using immunohistochemistry kit (Maixin Biotech, Fuzhou, China) according to the manufacturer's protocol. All sections were photographed by using inverted fluorescence microscope (Nikon, Japan).
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2

IHC Quantification of IGFBP7 Expression

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After processing tissue chips and formalin-fixed paraffin-embedded (FFPE) samples through a series of deparaffinization steps, including baking, xylene, and gradient alcohol, antigen retrieval was performed using citrate buffer. A 3% hydrogen peroxide solution was applied for 10 min, followed by blocking with goat serum for 10 min. The IGFBP7 primary antibody was incubated at 4 °C overnight. Subsequent staining was performed with an immunohistochemistry kit (Maixin Biotech, Fuzhou, China).
The staining area was divided into four grades based on the percentage of stained area over total tissue: 1 = <25%, 2 = 25–50%, 3 = 50–75%, and 4 = ≥75%. Staining intensity was divided into four grades: 0 (no staining), 1 (weak positivity), 2 (moderate positivity), and 3 (strong positivity). The combination scores were multiplied, producing a weighted score (ranging from 0 to 12). To conduct statistical analysis, a combination score > 6 was defined as high expression, while a score ≤ 6 was considered low expression. Two independent pathologists evaluated the results based on staining intensity and degree.
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3

Immunohistochemical Analysis of NPTX2 and Ki-67

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Immunohistochemistry was performed using an immunohistochemistry kit (Maixin Biotechnology, Fuzhou, Fujian, PR China) according to the manufacturer’s instructions. Briefly, tissue samples were paraffin-embedded, cut into 4-μm sections, and incubated with primary antibodies against NPTX2 and Ki-67 (Abcam) at 4°C overnight. After DAB staining, the sections were imaged with an optical microscope (Olympus), and staining intensity was assessed according to the German immunohistochemical scoring system (15 (link)).
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4

Paraffin-Embedded Tissue Immunohistochemistry

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Tissues were sent to make paraffin section by the Nanjing Drug Toxicology Research Institute. Blocking was performed by incubating 2 h at room temperature with PBS containing 10% goat serum. Then, sections were incubated with primary antibodies for 2 h at 4 × degrees celsius. Then the immunohistochemistry kit of Maixin Biotech was used. The immunoreactivity was finally examined by NanoZoomer 2.0 RS (Hamamatsu Photonics Co., Ltd, Shizuoka, Japan).
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5

Immunohistochemical Evaluation of Autophagy Markers

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Immunohistochemical staining was conducted using Immunohistochemistry Kit (Maixin, China). Briefly, 4 μm-thick histology sections were deparaffinized and hydrated. Antigen retrieval was performed by boiling at 100 °C for 10min in 10 mmol/l citrate buffer (pH = 6.0). Then sections were incubated with polyclonal antibody against human ATG12 (Abcam, Cambridge, UK), LC3 (Abcam, Cambridge, UK) overnight at 4 °C. Sections were then incubated with horseradish-peroxidase-conjugated anti-goat secondary antibody (DakoCytomation, Glostrup, Denmark) for 1 h at room temperature. The visualization signal was developed with 3,3-diaminobenzidine tetra hydrochloride staining, and the slides were counterstained in hematoxylin and observed under a light microscope (Olympus, Japan). For staining of ATG12 and LC3, the scores of positively labeled cell were recorded as: 0 (no staining, 0%), 1 (staining range, 1–25%), 2 (staining range, 26–50%), 3 (staining range, 51–75%) or 4 (staining range, 76–100%). Intensity scores were recorded as: 0, no labeling; 1, weak labeling; 2, moderate labeling; or 3, strong labeling. The multiplication of the above two scores representing the results as follows: 0–4 represents low expression, 5–12 represents high expression.
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6

Immunohistochemical Analysis of Cytoskeletal Proteins

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The paraffin sections were deparaffinized, followed by hydration, using an immunohistochemistry kit (Maixin Biotech. Co., Fuzhou, China) according to the manufacturer instructions. LIMK1, destrin, E-cadherin, vimentin, Ki-67, and CD34 antibodies (Abcam, Cambridge, UK) were incubated overnight at 4 °C, and normal rabbit immunoglobulin G was considered as a negative control. The specimens were visualized with 3,3′-diaminobenzidine and counterstained with hematoxylin. The staining was brown or tan and located in the cytoplasm or nucleus. The scores according to the degree of positive staining and the percentage of stained cells were as follows: 0, no coloring; 1, light brown; 2, dark brown; 0, staining cells < 5%; 1, staining cells between 5% and 25%; 2, staining cells between 26% and 50%; 3, staining cells > 50%. The score was obtained by adding the intensity and reactivity. The scores < 2 represented low expression, the scores ≥ 2 represented the high expression.
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7

Immunohistochemical Evaluation of ANXA5 Expression

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Following deparaffinization steps, including baking, xylene treatment, and a gradient alcohol series, antigen retrieval was conducted on tissue chip specimens (HStmA160CS01, OUTDO Biotech, Shanghai, China) using citrate buffer. Subsequently, the samples underwent the following procedures: removal of hydrogen peroxidase with a 3% hydrogen peroxide solution for 10 min, followed by blocking with goat serum for 10 min. The ANXA5 primary antibody (Proteintech, Wuhan, China) was then incubated overnight at 4 °C, and immunohistochemistry staining was carried out utilizing an immunohistochemistry kit from Maixin Biotech (Fuzhou, China).
The staining degree was assessed by categorizing the percentage of stained area into four grades: Grade 1 (≤ 25%), Grade 2 (25–50%), Grade 3 (50–75%), and Grade 4 (≥ 75%). Simultaneously, staining intensity was classified into four grades: Grade 0 (no staining), Grade 1 (weak positivity), Grade 2 (moderate positivity), and Grade 3 (strong positivity). These two scores were then multiplied together to generate a weighted score, which ranged from 0 to 12. The results were independently evaluated by two pathologists based on both staining intensity and degree.
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8

SOX10 Immunohistochemical Staining in Melanoma

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The IHC staining was determined by using immunohistochemistry kit (Maixin Biotech. Co., Fuz-hou, China) following the manufacturer’s procedures. The specific methods were as follows: the sections of melanoma and normal nevus tissue was deparaffinized by standard xylene-deparaffin procedure, which were subsequently dehydrated with ethanol. Antigen retrieval was carried out by citric acid and a pressure cooker. Then, enzyme closure was performed using with 3% hydrogen peroxide. These sections were incubated overnight at 4°C with SOX10 primary antibodies (ab227684, Abcam). Immunohistochemistry without the primary antibody was used as a negative control. After incubation with anti-SOX10, these sections were then washed by PBST and incubated with secondary antibodies. Finally, staining was visualized by DAB and counterstaining was performed with haematoxylin.
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9

Quantifying Macrophage Infiltration in Germinal Center Biopsies

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The contents of infiltrated macrophages in individual GC specimens were characterized by IHC using an avidin-biotin peroxidase complex method as previously reported [20] . Briefly, paraffin sections were deparaffinised and then hydrated using an immunohistochemistry kit (Maixin Biotech. Co., Fuzhou, China) according to the manufacturer's instructions. The individual tissue sections were incubated with polyclonal rabbit anti-CD68 and anti-CD163 (Maixin Biotech. Co., Fuzhou, China) overnight at 4ºC, and normal rabbit IgG was used as the negative control. The bound antibodies were detected by biotinylated goat anti-rabbit IgG, HRP-conjugated avidin and DAB. The staining was brown or tan and located in the cytoplasm. The percentages of CD68 + cells in three representative highpower fields of individual samples were analysed for macrophage infiltration and scored as 0 (<5% of CD68 + cells), 1 (5-25%), 2 (>25-50%), and 3 (> 50%) as previously described [21] . Individual specimens were evaluated by at least two pathologists in a blind manner.
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10

Immunohistochemical Evaluation of NPTX2 and Ki-67

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Immunohistochemistry was performed using an immunohistochemistry kit (Maixin Biotechnology, Fuzhou, Fujian, PR China) according to the manufacturer's instructions. Brie y, tissue samples were para n-embedded, cut into 4-µm sections, and incubated with primary antibodies against NPTX2 and Ki-67 (Abcam) at 4 °C overnight. After DAB staining, the sections were imaged with an optical microscope (Olympus), and staining intensity was assessed according to the German immunohistochemical scoring system [15] .
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