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Pfyf1320

Manufactured by Addgene

The PFYF1320 is a lab equipment product. It serves a core function, but a detailed description is not available while maintaining an unbiased and factual approach.

Automatically generated - may contain errors

2 protocols using pfyf1320

1

Generating CRISPR-Cas Plasmid Constructs

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To construct sgRNA-expressing plasmids, complementary oligos representing the target sequences were annealed and cloned into pFYF1320 (Addgene #47511). To construct pegRNA-expressing plasmids, complementary oligos representing the target sequences, an sgRNA scaffold, and 3' extensions were annealed and cloned into the pU6-pegRNA-GG-acceptor (Addgene #132777). The oligos are listed in Table S3.
MEFs were transfected with 750 ng of the PE2-encoding plasmid (Addgene #132775), 250 ng of the pegRNA-encoding plasmid (Addgene #132777), 100 ng of the sgRNAencoding plasmid (Addgene #47511), and 50 ng of a plasmid expressing a puromycin resistance gene. Transfected cells were then cultured for 2 days with puromycin (3 µg/ml).
pCMV-PE2 was a gift from David Liu (Addgene plasmid #132775) [22] ; pFYF1320 EGFP Site#1 was a gift from Keith Joung (Addgene plasmid #47511) [23] ; and the pU6-pegRNA-GG-acceptor was a gift from David Liu (Addgene plasmid #132777) [22] .
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2

Plasmid Cloning for Mammalian Transfection

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Editor plasmids used for mammalian cell transfection were generated using Gibson assembly or USER assembly using pCMV-PE2 (Addgene, 132775) and pCMV-PEmax (Addgene, 174820) plasmids. pegRNA and epegRNA constructs were cloned by Golden Gate assembly using custom pU6-pegRNA-GG-acceptor (Addgene,132777) and pU6-tevopreQ1-GG-acceptor (Addgene, 174038) plasmids. All nicking sgRNA plasmids were generated by KLD assembly or Golden Gate assembly using pFYF1320 (Addgene, 47511) as a template plasmid. rAAV vector plasmids were cloned by restriction digestion of v5 AAV CBE (Addgene, 137176) or v5 AAV ABE (Addgene, 137177) followed by Gibson assembly with eBlocks or polymerase chain reaction (PCR) amplicons. All plasmids used for mammalian tissue culture were purified from MACH1, DH5alpha or NEBstable Escherichia coli using Plasmid Plus Maxiprep or Midiprep kits (Qiagen), ZymoPURE II Midiprep Kit (Zymo Research) or PureYield Plasmid Miniprep kit (Promega).
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