The largest database of trusted experimental protocols

14 protocols using confocal dishes

1

Evaluating β-Catenin Localization in PC3 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Human PC3 cells (2 × 106) were seeded in confocal dishes (Corning, United States), and incubated with MOA (0, 20, or 40 μg/ml) for 48 h. The cells were fixed in 4% paraformaldehyde for 20 min at room temperature, washed three times with PBS, and permeabilized with PBS containing 0.5% Triton-X-100 for 15 min at room temperature. The cells were then washed three times with PBS. Five percent BSA was added to the cells, and they were incubated overnight at 4°C. The cells were then incubated with a β-catenin antibody (1:50, Abcam, San Francisco, CA, United States) overnight at 4°C, washed three times, then incubated with a secondary antibody (goat Alexa 647 and mouse IgG, 1: 200, Abcam, CA, United States) for 1 h at room temperature. Then, DAPI was added and the cells were incubated at room temperature for 15 min to stain the cell nucleus. Cells were visualized using a confocal fluorescence microscope (Olympus Corporation, FV500).
+ Open protocol
+ Expand
2

Visualizing Aptamer Internalization in A549 Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
The samples were prepared as described below: A549 cells were seeded in confocal dishes (Corning Co.) and incubated for 24 h. After two washes with preheated D-PBS, the cells were incubated with 250 nM FITC-labeled aptamers in 1 mL of fresh cell medium and 10% FBS for 30 min at 37°C, after which Alexa Fluor 633 conjugated with transferrin from human serum (5 µg/mL, Invitrogen), or LysoTracker Red DND-99 (50 nM, Invitrogen) was added and co-incubated for another 30 min at 37°C. After washing three times with D-PBS, the fluorescence images of internalization were collected on a FV500-IX81 confocal microscope (Olympus America Inc., Melville, NY) with 20× and 100× objectives (Olympus, Melville, NY). Excitation wavelength and emission filters were as follows: FAM, 488 nm laser line excitation, emission BP520_12 nm filter; TAMRA, 543 nm laser line excitation, emission BP580_20 nm filter; Alexa 633, 633 nm laser line excitation, emission LP650 filter.
+ Open protocol
+ Expand
3

Lanatoside C Modulates Oxidized LDL Uptake

Check if the same lab product or an alternative is used in the 5 most similar protocols
Peritoneal macrophages were seeded on confocal dishes (Corning, NY) at a density of 5 × 105 cells/ml before being serum starved and pre-incubated with vehicle control (PBS contain 0.1% DMSO), or lanatoside C (10 μM) for 12 h. Then, the cells were incubated with DiI–labeled oxidized LDL for 4 hours. The cells were fixed in phosphate-buffered 4% formalin for 10 min. The cells were analyzed by confocal microscopy. Then, the cells were quantitatively analyzed via flow cytometry.
+ Open protocol
+ Expand
4

Immunofluorescence Imaging of BUC Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
BUC cells were grown on confocal dishes (Corning Inc), rinsed twice with PBS and then fixed for 15 min using 4% paraformaldehyde in PBS on ice. Cells were washed 3 times with PBS, and then permeabilized using 0.1% Triton X‐100 in PBS on ice for 10 min. After washing twice with PBS, they were blocked using 5% BSA in PBST at 37°C for 30 min. Cells were then incubated with primary antibodies at 37°C for 1 h. Cells were washed with PBST, then cells were incubated with the corresponding secondary antibodies for 30 min at 37°C. The cells were then stained with DAPI to stain the nuclei. Fluorescent images were acquired using an OLYMPUS FV1000 confocal microscope (Olympus). Relative mean fluorescence densities were analyzed using ImageJ software (NIH) and plots were constructed using GraphPad Prism 6 software (GraphPad Software, Inc).
+ Open protocol
+ Expand
5

Immunofluorescence Localization of CLIC4 in MN9D Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
CLIC4 localization was detected by immunofluorescence assay. In brief, MN9D cells of different groups cultured in confocal dishes (Corning Life Sciences) were fixed with 4% paraformaldehyde for 15 min at room temperature, followed by permeabilization with 0.3% Triton X-100 treatment for 10 min. Cells were then blocked with 3% BSA for 1 h at 37 °C and stained with primary antibody (anti-CLIC4, 1:200, Abcam, Cat#ab183043) overnight at 4 °C. After washing three times, cells were incubated with secondary antibody conjugated to Alexa Fluor-488 (1:500, Invitrogen, Carlsbad, CA, USA) for 1 h and DAPI (Invitrogen) for 20 min at 37 °C. Fluorescence images were acquired using Confocal Laser Scanning Microscopy (Leica, Heidelberg, Germany).
+ Open protocol
+ Expand
6

Honokiol-Loaded MSNP Therapy for VSMCs

Check if the same lab product or an alternative is used in the 5 most similar protocols
VSMCs were obtained from the Cell Bank of the Chinese Academy of Sciences (Shanghai, China). Honokiol was purchased from Selleck Chemicals (Houston, USA, catalog no. S2310), MSNPs (catalog no. 643645) and F‑127 pluronic gel were purchased from Sigma‑Aldrich Co. (St Louis, MO, USA). Transmission electron microscope was acquired from FEI (Hillsboro, Oregon, USA). FBS and 0.25% (w/v) trypsin−EDTA were obtained from Corning (New York, USA). DMEM and penicillin−streptomycin solution were purchased from Gibco (Thermo Fisher Scientific, Waltham, MA, USA). Culture flasks (25 cm2 surface area), culture plates, a filter of 8 μm pore size and confocal dishes were acquired from Corning Incorporated (Corning, NY, USA). 2F Fogarty embolectomy catheters were obtained from Edwards Lifesciences (Irvine, CA, USA). WST-1 was purchased from Beyotime Biotechnology (Shanghai, China). Foxp3/Transcription Factor Staining Buffer Set was purchased from Thermo Fisher Scientific. The primary antibodies used in Western blotting analysis were: anti-p-smad3, anti-p-ERK1/2 and anti-PCNA (Immunoway Biotechnology, NY, USA). α‑SMA antibody was obtained from Abcam (Cambridge, UK).
+ Open protocol
+ Expand
7

Singlet Oxygen Generation Measurement

Check if the same lab product or an alternative is used in the 5 most similar protocols
Singlet oxygen generation was measured both in solutions and cells using SOSG and DCFH‐DA as indicator, respectively. Briefly, free IR783, free BC, and IR783/BC NPs (at the equivalent concentration of BC at 1 μM) was mixed with SOSG probe (5 μM) in PBS. The solutions were exposed to light irradiation and the fluorescence intensity was detected at predetermined time intervals (Ex. 488 nm). Besides, the intracellular 1O2 generation was detected by CLSM. HCT116 cells were seeded in confocal dishes (Corning) at a density of 10,000 cells/well and treated with different formulations for 6 h. Subsequently, the cells were washed with PBS for three times and incubated with DCFH‐DA (10 μM) for 30 min. The cells were irradiated by LED (530 nm, 50 mW/cm2, 5 min) for the light irradiation groups. The intracellular fluorescence was observed by CLSM imaging and flow cytometry to evaluate the 1O2 generation.
+ Open protocol
+ Expand
8

Mitochondrial Morphology Evaluation

Check if the same lab product or an alternative is used in the 5 most similar protocols
MitoTracker Green dye (Thermo Scientific, USA) was used for mitochondrial morphology analysis and further mitochondrial network analysis. Cells cultured on confocal dishes (Corning, USA) were stained with MitoTracker Green (100 nM) and Hoechst dye (Hoechst, 33342) for 30 min at 37 °C, and then observed under Fluorescence Confocal Microscopy. Mitochondrial network morphology was analyzed using MiNA plugin of Fiji software (https://imagej.net/Fiji) [22 (link)].
+ Open protocol
+ Expand
9

Hypoxia-Induced Cellular Uptake of Nanomedicine

Check if the same lab product or an alternative is used in the 5 most similar protocols
The amount of ∼1 × 106 HepG2 cells per dish were seeded in confocal dishes (Corning, New York, NY, USA) and cultivated in a cell culture medium for 24 h. Afterwards, cells were incubated with Cy5-modified HPMPC@DOX or RPMPC@DOX at equal amounts of DOX for 1, 2, and 4 h in hypoxic environment. Hypoxia environment or normoxic environment were generated in the cells by cultivating in Biospherix C21 hypoxic chamber supplemented with 1% of oxygen or air, respectively. Cells were rinsed and stained with DAPI and observed with a Nikon laser confocal microscope (C2plus, Nikon, Tokyo, Japan). The cellular uptake of HPMPC@DOX or RPMPC@DOX was performed with flow cytometry (Olympus IX71, Tokyo, Japan). HepG2 cells were seeded in 6-well plates at a density of 1 × 105 cells per well and incubated for 24 h. Then, cells were cultivated with HPMPC@DOX or RPMPC@DOX at equal amounts of DOX for 4 h in hypoxic environment. After that, cells were washed several times with PBS and analyzed by flow cytometry (Olympus IX71, Tokyo, Japan).
+ Open protocol
+ Expand
10

Evaluating LDNLC Uptake in MCF-7 ADR Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
To evaluate the cellular uptake of LDNLC in an MCF-7 ADR cell line (Cell Bank of Shanghai Institute of Biochemistry and Cell Biology; Chinese Academy of Sciences, Shanghai, China), MCF-7 ADR cells were seeded in confocal dishes (Φ=15 mm; Corning Incorporated, Corning, NY, USA) at a density of 1 × 105 cells/dish and cultured overnight (humidified atmosphere containing 5% CO2 at 37°C). The dishes were then supplemented with 2 mL serum-free medium (DMEM containing 10% FBS; Thermo Fisher Scientific). The culture medium mentioned in the following section was DMEM (unless otherwise stated) containing DNLC or LDNLC. Additionally, cells were incubated with 60 μM of Di (an inhibitor of NQO1) solution at 37°C for 3 h prior to nanoparticles’ addition. Following 12 h of incubation with nanoparticles, cells were fixed with 4% formaldehyde for 15 min at 37°C. Cells were qualitatively assessed using a Leica confocal laser scanning microscope (LSM 710, ×600; Carl Zeiss Meditec AG, Jena, Germany).27 (link) DOX fluorescence (excitation 510 nm, emission 550 nm) was expressed as red, Hoechst 33342 (excitation 405 nm, emission 460 nm) was expressed as blue.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!