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7 protocols using pdsred er

1

Generating Mutant GJB1 Expression Plasmids

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The full‐length coding region of human GJB1 was cloned into pcDNA3.1/myc‐His (Invitrogen, Grand Island, NY) to generate wild‐type (WT) GJB1 expression plasmids. The GJB1 mutations identified in this study were separately introduced into the WT expression plasmids using a QuikChange Site‐Directed Mutagenesis Kit according to the manufacturer's recommendations (Agilent, Santa Clara, CA). The transfection marker pDsRed1‐N1, the endoplasmic reticulum marker pDsRed‐ER, and the Golgi marker pDsRed‐Monomer‐Golgi were all purchased from Clontech (Mountain View, CA).
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2

Visualizing SARS-CoV-2 Spike Protein

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Confocal immunofluorescence microscopy was performed on LSM510 (Carl-Zeiss) as described [60 ,61 (link)]. HeLa cells were transfected with an S-expressing plasmid and pDsRed-ER (Clontech) for 36 h. Cells were then fixed and stained with anti-V5 antibody. Nuclei were counter-stained with 4', 6-diamidino-2-phenylindole (DAPI) before mounting.
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3

Characterization of Mouse nAChR α4 with Super Ecliptic pHluorin

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Previously characterized mouse nAChR α4SEP with a super ecliptic pHluorin incorporated on the C-terminus of α4 was a gift from Dr. Christopher I. Richards (University of Kentucky, Lexington, Kentucky) (Richards et al., 2011 (link)). pDsRed-ER was from Clontech Laboratories. Human α4 and β2 cDNA were gifts from Prof. Steven M. Sine (Mayo Clinic, Rochester, Minnessota). Rat α4 and β2 used for generating the stable cell line were provided by Dr. Jim Boulter, University of California, Los Angeles, CA. The HA epitope, YPYDVPDYA, and a stop codon were inserted after the last codon of the 3′-translated region of the subunit DNA of the β2 using the extension overlap method as described in Vallejo et al (Vallejo et al., 2005 (link)).
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4

GLT8D1 Expression Construct Generation

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A full-length coding region of GLT8D1 was cloned into pFLAG-CMV-5a (Sigma-Aldrich, St. Louis, MO) to generate the wild-type (WT) GLT8D1 expression construct. The 2 GLT8D1 variations, p.I290M (c.870C>G) and p.R92C (c.274 G>A), were separately introduced into the WT expression plasmids by using the QuikChange Site-Directed Mutagenesis method (Agilent, Santa Clara, CA). The endoplasmic reticulum (ER) marker pDsRed-ER and the Golgi marker pDsRed-Monomer-Golgi were purchased from Clontech (Mountain View, CA). HEK293T cells were maintained in Dulbecco modified eagle medium supplemented with 10% FBS. Transient transfections were performed using Lipofectamine 2000 (Thermo Fisher Scientific).
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5

Cloning and Mutagenesis of Eag1 and MKRN1

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cDNAs for rat Eag1 (Dr Olaf Pongs, Saarland University, Germany) and MKRN1 long isoform were subcloned into pcDNA3.1, pcDNA3.1-Myc, or pcDNA3.1-Flag vectors (Invitrogen). Disease-causing (G348R, G469R, and I467V) and glycosylation-deficient Eag1 mutations (N388Q and N406Q; Eag1-QQ), as well as MKRN1 short form and the catalytically inactive E3 ligase mutant MKRN1-H307E, were generated using the QuikChange site-directed mutagenesis kit (Agilent Technologies), followed by verification with DNA sequencing. The other cDNA constructs include pDsRed-Monomer-Membrane (Clontech), pDsRed-ER (Clontech Laboratories), and HA-Ubiquitin (Addgene).
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6

Intracellular Localization of DHCR24 Protein

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To determine intracellular localization, cells grown on coverslips were cotransfected with a DHCR24 expression construct and an ER marker plasmid (pDsRed-ER, Clontech). Cells were then fixed with 3% (v/v) formaldehyde/PBS for 10 min. Cells were rinsed with PBS (three times for 5 min) and then permeabilized with 0.3% (v/v) Triton X-100/PBS for 5 min. Cells were washed with PBS, then incubated with 10% (v/v) FCS/PBS for 1 h. Cells were then incubated with 1:2000 V5 antibody in 10% FCS/PBS including 0.1% (w/v) saponin for 16 h at 4°C. After washing with 10% FCS/PBS (three times for 5 min), cells were incubated with 1:1,000 Alexa Fluor-488-conjugated secondary antibody (Molecular Probes) in 10% FCS/PBS for 1 h. Cells were washed with 10% FCS/PBS (three times for 5 min) and then mounted on glass slides with ProLong Gold AntiFade Reagent with DAPI (4′,6-diamidino-2-phenylindole; Life Technologies). Images were obtained using a Nikon C1 confocal microscope with laser excitation at 408 nm (DAPI), 488 nm (DHCR24-V5) and 561 nm (ER marker).
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7

Kv1.3 Channel Constructs and Markers

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T.C. Holmes (University of California, Irvine, CA) provided the rat Kv1.3 in a pRcCMV construct. The channel was subcloned into pEYFP-C1 and pECerulean-C1 (Clontech). All Kv1.3 mutants were generated in the pEYFP-Kv1.3 channel using a QuikChange site-directed mutagenesis kit (Agilent Technologies). pEYFP-Kv1.3CBDless was subcloned into pECerulean-C1. For oocyte injection, Kv1.3 and Kv1.3CBDless were subcloned into pcDNA3 and were placed under the control of a T7 promoter and then the cRNA was synthetized. J.R. Martens (University of Florida Medical School) provided the rat Caveolin 1 (Cav1) in pECerulean-C1. Cav1 was cloned into pcDNA3. The plasma membrane marker Akt-PH-pDsRed (pDsRed-tagged pleckstrin homology (PH) domain of Akt) was a kind gift of F. Viana (Universidad Miguel Hernández, Spain). The ER marker (pDsRed-ER) was obtained from Clontech. The mitochondrial marker (pmitoRFP) was constructed by fusing the mitochondrial transit sequence of the human isovaleryl coenzyme A dehydrogenase to the N-terminus of RFP (pDsRed1-N1, Clontech). Constructs were verified by sequencing.
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