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4 protocols using anti top2a

1

Immunoblotting and Immunohistochemical Analysis

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Immunoblotting was performed using anti-phospho-RB (Cell Signaling, Danvers, MA, USA), anti-RB (GeneTex, Irvine, CA, USA), anti-phospho-Akt(Ser473) (Cell Signaling), anti-Akt (Cell Signaling), anti-phospho-Erk1/2(Thr202/Tyr204) (Cell Signaling), anti-Erk1/2 (Cell Signaling), anti-TOP2A (Cell Signaling), anti-CCND1 (Cell Signaling), anti-γH2AX (Cell Signaling), anti-CDK2 (GeneTex), anti-RAD51 (GeneTex), anti-CDK4 (Cell Signaling), and anti-GAPDH (GeneTex) antibodies followed by horseradish peroxidase-conjugated secondary antibodies and visualization using an enhanced chemiluminescence detection system. Immunohistochemical (IHC) sample preparation and staining with anti-GFAP (Genetex), anti-phospho-RB (Cell Signaling), anti-Ki-67 (Cell Signaling), and anti-γH2AX (Cell Signaling) antibodies were carried out as previously described [48 (link)]. Uncropped Western blot images are provided in Figure S5.
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2

Comprehensive Immunoblotting Antibody Panel

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The following commercially available primary antibodies were used for immunoblotting: anti-IRS2 (Cell Signaling Technologies, 4502) 1:750; anti-Cdh1/Fzr1 (Sigma Aldrich, CC43) 1:500; anti-anillin (a gift from Christine Field (21 (link))) 1:1000; anti-Aurora B (Bethyl, A300-431) 1:1000; anti-Eg5 (Cell Signaling Technologies, 4203) 1:1000; anti-Top2A (Cell Signaling Technologies, 12286) 1:1000; anti-TK1 (Cell Signaling Technologies, 8960) 1:1000; anti-Mps1 (Abcam, ab11108), 1:1000); anti-APC3 (BD Transduction Laboratories, 610455) 1:500; anti-cyclin B1 (Santa Cruz Biotechnology, sc-752) 1:500; anti-Cdc20 (Santa Cruz Biotechnology, sc-8358) 1:500; anti-c-Myc (9E10, Santa Cruz Biotechnology, sc-40) 1:1000; anti-HA-peroxidase (Sigma Aldrich), 1:1500; anti-cyclin A2 (Santa Cruz Biotechnology, sc-596) 1:500; anti-IRS1 (Cell Signaling Technologies, 2382) 1:750; anti-MyoD1 (Cell Signaling Technologies, 13812) 1:750; anti-GAPDH (Abcam, ab8245) 1:2000; anti-α tubulin (Abcam, ab7291 and Santa Cruz Biotechnology, sc-8035) 1:1000 for both; anti-vinculin (Santa Cruz Biotechnology, sc-73614) 1:2000. Secondary antibodies used: anti-rabbit IgG-HRP (GE Healthcare, NA934) and anti-mouse IgG-HRP (GE Healthcare, NA931V), both at 1:3000 dilutions.
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3

Western Blot Analysis of Cell Signaling Proteins

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Cells were harvested and lysed in 2x SDS-PAGE sample buffer and boiled for 5 minutes. The samples were separated on 4–20% TGX gels (Biorad), transferred to PVDF membranes, and probed with primary and horseradish peroxidase-conjugated secondary antibodies. Primary antibodies purchased from Cell Signaling Technology were: anti-phospho-CDC2/CDK1-Y15 (Cat# 9111), anti-CDC2/CDK1(Cat# 9112), anti-Phospho-PP1α-T320 (Cat# 2581), anti-PP1α (Cat# 2582), anti-γH2AX (Cat# 2595), anti-Cyclin B1 (Cat# 12231), anti-TOP2A (Cat# 12286), anti-CDC20 (Cat# 4823), Aurora kinase sampler kit (Cat# 3875) and phosphor-Ser/Thr kinase substrate antibody sampler kit (Cat# 9920). Rabbit anti-β-actin polyclonal antibody (Cat# A5441), anti-Flag (Cat# F7425), anti-NUSAP1 (Cat# SAB4502109) and mouse anti-Myc antibodies (Cat# M4439) were obtained from Sigma Aldrich. Rat anti-hemagglutinin (HA) high-affinity antibody (Cat# 11-867-431-001) was obtained from Roche. Mouse anti-V5 and anti-V5-HRP antibodies (Cat# R960-25 and R961-25) were obtained from Invitrogen. Anti-phospho-Ser/Thr-Pro MPM2 antibody (Cat# 05–368) was purchased from Millipore. Normal rat IgG (Cat# sc-2026) and mouse IgG (Cat# sc-2025) were obtained from Santa Cruz. Mouse anti-BGLF4 antibody has been described previously [118 (link)].
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4

Protein Extraction and Analysis in Zebrafish

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Cells (0 dpf mRNA overexpression samples) or larvae (3 dpf Top2 inhibitor–treated larvae) were lysed in radioimmunoprecipitation assay buffer (Santa Cruz Biotechnology) supplemented with a cOmplete Mini EDTA-free protease inhibitor tablet (Roche), 5 mM sodium orthovanadate (New England Biolabs), and 10 mM sodium fluoride (Sigma-Aldrich) for 50 min on ice with vortexing every 10 min. The resulting lysate was centrifuged at 14,000g for 15 min at 4°C. The entire volume of the supernatant was saved and subsequently combined with 5× Laemmli buffer before gel loading for Western blot analysis. Protein concentration was measured by Bradford (Bio-Rad) assay. Anti-TOP2A (Cell Signaling Technology, D10G9), anti-H3K27me3 (Cell Signaling Technology, C36B11), and anti–β-actin (Cell Signaling Technology, D6A8) antibodies were used for detection. Signal was detected by enhanced chemiluminescence.
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