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5 protocols using amg232

1

Yeast Growth Inhibition Assay

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(±)-Nutlin-3 (Cayman Chemicals, Ann Arbor, MI, USA) was dissolved in DMSO to make 50 mM stock solution. MI-773 (MedChem Express Co. Ltd., China) and AMG232 (MedChem Express) were dissolved in DMSO to make 10 mM stock solutions. Overnight yeast cultures were washed and then diluted to OD600 = 0.2 in 1 mL SD-Leu-Trp-His-Ade medium containing the desired concentration of the drug. The cultures were then placed in a 30 °C incubator with shaking for 3 days. Growth of the cultures was monitored by measuring the absorbance at 600 nm using the Implen Nanophotometer. This assay was also performed in a 96-well plate format with 200 μL SD-Leu-Trp-His-Ade medium containing the desired concentration of the drug in duplicate. OD600 at different time points was measured using a Gen 5TM (BIO-TEK Instrument, Vermont, USA) microplate reader. The average of the two OD600 readings was calculated and used in the analysis.
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2

Screening compounds for cell viability

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The following compounds were purchased from (MedChemExpress Monmouth Junction, NJ, USA): CCT251545, MTX‐211, CUDC305, CUDC427, AMG232, ML329 and fasudil. Both 666‐15 and GSK‐J4 were purchased from R&D Systems (Minneapolis, MN, USA). Larotrectinib was purchased from Abmole (Houston, TX, USA). All other agents were purchased from Selleckchem (Houston, TX, USA). All agents were received as a dried powder and were reconstituted in DMSO (D8418, Sigma Aldrich, St. Louis, MO, USA) to a concentration of 10 mM or lower based on solubility specifications per manufacturer. Agents were plated at four concentrations (2, 0.2, 0.02 and 0.002 μM) in triplicate in a 384‐well format using the HP Tecan D300e and Perkin Elmer SciClone G3 digital dispensers. Cells were grown in T‐75 flasks until 80% confluent, trypsinised and plated at a density of 2000–2500 cells per well and incubated at 37°C with humidified 5% CO2 for 72 h. Cell viability was measured using CellTiter‐Glo 2.0® (G9243, Promega, Madison, WI, USA) per manufacturer's instructions. Luminescence was measured using a BioTek Synergy HT plate reader (BioTek, Winooski, VT). IC50 values were determined using a nonlinear best fit method.
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3

Fluorescent Live/Dead Cell Staining

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CellTracker™ CMFDA (5-chloromethylfluorescein diacetate) green fluorescent dye (5 µM) or CellTracker™ CMAC (7-amino-4-chloromethylcoumarin) blue fluorescent dye (10 µM) were used to stain and detect living tumor cells or T-cells. Before co-culture with T-cells, culture media was removed and pre-warmed CellTracker™ in “working solution” was added as instructed in the manufacturer’s protocol (Invitrogen, Waltham, MA). The working solution with the CellTracker™ was replaced with fresh media after 30 min of incubation at 37 °C. Green fluorescent tumor cells with or without 1 µM AMG-232 (MedChem Express) pretreatment were co-cultured with or without 25 µg/mL pembrolizumab pre-treated cytotoxic T-cells (TALL-104) with a 2:1 effector-to target cell ratio (E:T) for 12 or 16 h. RPMI-1640 media containing 20% FBS and 100 units/mL IL-2 was used in the co-culture system. For analysis of cell death, 1-µM red fluorescent ethidium homodimer-1 (EthD-1) was added and incubated for another 30 min to detect dead cells (Invitrogen, Waltham, MA). For the quantification of dead/live cells, fluorescence microscopy was used to take images at 10× magnification. The number of red/green/blue colored cells in random fields was counted by two independent investigators and expressed as a dead/live cell ratio. At least 100 cells were evaluated per sample, with three independent replicates.
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4

In Vitro Transcription of 3pRNA

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3pRNA was in vitro transcribed from a DNA template by using the phage T7 polymerase from the Transcript Aid T7 High Yield Transcription Kit (Fermentas), as described previously (Goldeck et al., 2014 (link)). Inert AC20 control RNA (5′-CACAACAAACCAAACAACCA-3′) and polyA RNA were obtained from Biomers and Sigma–Aldrich, respectively. Murine IFNα was purchased from BioLegend. The MDM2 inhibitor AMG232 was purchased from MedChemExpress. 5-AZA, Decitabine, and ATRA were all purchased from MedChemExpress, dissolved in dimethyl sulfoxide and diluted in cell culture medium for the treatment of B16 melanoma cells.
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5

Cell Line Maintenance and Drug Testing

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The HEL, MOLM-13, MOLT-4, THP-1, U-937, OCI-AML3, SIGM5, K-562, NOMO-1 cell lines were maintained in RPMI-1640 + 10% FBS; MV4–11 and UKE-1 in IMDM + 10% FBS; solid tumor cell lines as follows: HCT 116 in RPMI + 10% FBS, MCF7 in IMDM + 10% FBS, and Caco-2, A549, HepA2 in DMEM + 10–20% FBS. Cells were obtained from ATCC and DSMZ. OP9-DL1 was maintained in αMEM without nucleosides + 20%FBS + 1% L-glutamine on 0.1% gelatin coated flasks. AMG 232 was supplied by MedChemExpress. Puromycin was used at 1–2μg/mL. MLN4924 (Chemietek) and MG132 (Selleckchem) were used at 1 μM.
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