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5 protocols using erythropoietin epo

1

Expansion and Differentiation of HUDEP-2 Cells

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HUDEP-2 cells (provided by Dr. Y. Nakamura, RIKEN BioResource Center, Tsukuba, Ibaraki, Japan) were maintained in Iscove’s modified Dulbecco’s medium (IMDM; Gibco, Grand Island, NY, USA) supplemented with 1 μM dexamethasone (Sigma-Aldrich, St. Louis, MO, USA), 1 μg/mL doxycycline (Sigma-Aldrich, St. Louis, MO, USA), 50 ng/mL human stem cell factor (SCF), 3 U/mL erythropoietin (EPO) (all cytokines were acquired from PeproTech, Rocky Hill, NJ, USA), and 1× glutamine, penicillin, and streptomycin (Gemini Bio-Products, Sacramento, CA, USA). A total of 2.5 × 106 HUDEP-2 cells were transduced with 5 mL of raw virus in a total volume of 10 mL in a T75 flask. Approximately 24 h later, cells were pelleted, medium was changed, and cells were expanded for 7 days. Approximately 1.0 × 107 transduced HUDEP-2 cells were then harvested for gDNA isolation, and the remaining cells were plated on an MS5 stromal cell layer in IMDM supplemented with 1× glutamine, penicillin, and streptomycin, holo-human transferrin (330 μg/mL, Sigma-Aldrich, St. Louis, MO, USA), heparin (2 IU/mL, Sigma-Aldrich, St. Louis, MO, USA), recombinant human insulin (10 μg/mL, Sigma-Aldrich, St. Louis, MO, USA), 3 U/mL EPO, and 5% inactivated human plasma (Grifols USA, Los Angeles, CA, USA). Cells were co-cultured for 4 days, after which ∼1.0 × 107 cells were harvested for RNA extraction.
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2

Quantifying Mutant IDH Enzyme Activity

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Compounds of CP-17 and AGI-6780 were purchased from TargetMol (Shanghai, China) and MedChemExpress (Shanghai, China) respectively. The human recombinant C-terminal FLAG-tag IDH enzymes including IDH2/R140Q, IDH2/WT, IDH1/R132H and IDH1/WT homodimer were purchased from BPS Bioscience (San Diego, USA). Antibodies of Hemoglobin γ (HBG) (catalog number: 39386S), H3K9me3 (catalog number: 5327S), H3K27me3 (catalog number: 9733S), H3K4me3 (catalog number: 9725S), and H3 (catalog number: 4499S) were purchased from Cell Signaling Technology (Massachusetts, USA). Recombinant human granulocyte-macrophage colony-stimulating factor (GM-CSF) and erythropoietin (EPO) were obtained from Peprotech (New jersey, USA). NADPH, NADP, α-KG, isocitrate, D-2-HG acid disodium, DMSO, diaphorase and resazurin were purchased from Sigma-Aldrich (Missouri, USA).
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3

Genotyping Somatic Mutations in Hematopoietic Cells

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For liquid cultures, CD34-positive and Lin-negative cells from PBMC were single-cell sorted into 96-well plates containing 100 µL of free medium consisting of StemSpam SFEMII (Stemcell Technologies) with human cytokines stem cell factor (SCF) (20 ng/mL), interleukin-3 (IL-3) (20 ng/mL), IL-6 (20 ng/mL), IL-9 (20 ng/mL), IL-11 (20 ng/mL), thrombopoietin (TPO) (20 ng/mL), granulocyte-colony stimulating factor (G-CSF) (20 ng/mL), granulocyte monocyte-colony stimulating factor (GM-CSF) (50 ng/mL), and erythropoietin (EPO) (3 U/mL) (Peprotech, Rocky Hill, NJ) and fresh media (50 µL) was added on day 8 of culture. PBMCs were seeded at a density of 100,000 cells/mL in methylcellulose media containing cytokines (H4034, StemCell technologies) and cultivated for 14 days at 37°C and 5% CO2. On day 14, DNA was extracted from colonies (either from liquid culture or from methylcellulose assay) using Chelex 100 Resin (Cat. No. 143-2832, Bio-Rad Laboratories, Hercules, CA). Known somatic mutations were genotyped either by allele-specific polymerase chain reaction (AS-PCR) for JAK2-V617F,20 (link) or by Sanger sequencing of amplicons covering the mutated gene regions (details in Supplemental Methods).
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4

Hematopoietic Endothelial Differentiation from Pluripotent Stem Cells

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All experiments proceeded under authorization from the Institutional Review Board for Human Research at the CHA University (1044308‐202204‐LR‐023‐02) for CHA52 and Konkuk University (KUH1280081 for H1 and H9). Undifferentiated human PSCs (CHA52, H1, H9 embryonic stem cell line, PSCs) were seeded onto Matrigel®‐coated plates with mTeSR™1 medium (85850; StemCell Technologies Inc.) to differentiate HE from PSCs. The cells were incubated with APEL™ 2 medium supplemented with 3 nM − 1.5 μM CHIR‐99021 (S2924, Selleck Chemicals), 20 ng/ml of vascular endothelial growth factor (VEGF)165 (100‐20; PeproTech Inc.), and 25 ng/ml HumanKine® BMP‐4 (HZ‐1045; Proteintech Group Inc.) for 3 days to induce mesoderm.21 Based on previous, to induce and expand the HE, cells were then incubated with APEL™ 2 medium supplemented with 25 ng/ml HumanKine® BMP‐4 (HZ‐1045, Proteintech), and 250 ng/ml stem cell factor (SCF; 300‐07), 20 ng/ml VEGF165 (100‐20), 200 ng/ml FMS‐like tyrosine kinase 3 (Flt3)‐Ligand (300‐19), 100 ng/ml Thrombopoietin (TPO) (300‐18) and 20 ng/ml erythropoietin (EPO) (100‐64; all from PeproTech) as described previous papers.12, 17, 18, 22, 23, 24, 25, 26 We isolated CD34+ cells from PSC‐derived HE by magnetic‐activated cell sorting (MACS) using CD34 MicroBead Kits (Miltenyi Biotec) as described by the manufacturer.27
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5

Erythroid Differentiation of CD34+ HSPCs

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CD34+ HSPCs were expanded for 5 days in HEM and were subsequently differentiated to the erythroid lineage using the erythroid progenitor medium (EPM) containing StemSpan SFEM-II medium supplemented with 50 ng/ml SCF, 3 U/ml erythropoietin (Epo), 20 ng/ml IL-3, and 40 ng/ml insulin growth factor-1 (IGF-1) (all the cytokines and growth factors are purchased from Peprotech, Rocky Hill, NJ, USA), for 10–12 days. A previously described protocol was used with minor modifications to induce terminal erythroid differentiation28 (link). Briefly, cultured erythroid cells were seeded at a density of 5 × 105 cells/ml in erythroid differentiation medium-I (CD34-EDM-I) consisting of IMDM with Glutamax (ThermoFisher Scientific), 5% human AB serum (Sigma-Aldrich), 2 IU/ml heparin (Sigma-Aldrich), 10 μg/ml insulin (Sigma-Aldrich), 5 U/ml Epo (Peprotech), 500 μg/ml holotransferrin (Sigma-Aldrich) and 1 μM mifepristone (Sigma-Aldrich). On day 4, the cells were seeded at a density of 1 × 106 cells/ml in CD34-EDM-II, which consisted of CD34-EDM-I without SCF, and were cultured with the medium change every other day until the end of differentiation. Total bone marrow (BM) cells isolated from NSG and NBSGW mice were also cultured using this four-step protocol described above for HSPC expansion and erythroid differentiation.
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