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5 protocols using ab179843

1

Immunoblotting Analysis of Autophagy and Apoptosis Markers

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MLO-Y4 cells were homogenized in lysis buffer, and protein concentration was quantified using the Bradford assay. After separation through 15% SDS-PAGE and transferred onto PVDF membranes, cell lysate was subjected to immunoprecipitation with specific antibodies for 1 h at RT, followed by immunoblotting according to the kit’s protocols (Roche, Basel, Switzerland). The primary antibodies used for immunostaining were: rabbit anti-JNK1 (1:1000, Abcam, ab199380), rabbit anti-p-JNK1 ab47337, rabbit anti-AMPK (1:1000, Abcam, ab32382), rabbit anti-p-AMPK (1:1000, Abcam, ab133448), rabbit anti-Beclin 1(1:1000, Abcam, ab207612), rabbit anti-Bcl-2 (1:1000, Abcam, ab182858), rabbit anti-LC3 (1:1000, Abcam, ab128025), rabbit anti-Cleaved Caspase-3 (1:1,000, Abcam, ab32042), rabbit anti-Cleaved PARP (1:1000, Abcam, ab32064), rabbit anti-SOD1 (1:1000, Abcam, ab179843), rabbit anti-SOD2 (1:1000, Abcam, ab74231), rabbit anti-Actin (1:3000, Abcam, ab8227). The secondary antibodies used for immunostaining were: mouse HRP (1:2000, Abcam, ab6728), rabbit HRP (1:2000, Abcam, ab6721).
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2

Antibodies for ACBD5, PEX14, VAPB Immunoblotting

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PLA: Anti-ACBD5 rabbit antibody (HPA012145; Sigma-Aldrich), anti-PEX14 rabbit antibody (Grant et al., 2013 (link)) (generated by D. Crane, Griffith University, Brisbane, Australia) and anti-VAPB mouse antibody (66191-1-Ig; Proteintech) were used. Immunoblots: Anti-ACBD5, PEX14 and VAPB as above, Anti PMP70 (SAB4200181; Sigma) Anti-PEX11β (ab 182100; Abcam), Anti-Catalase (ab179843; Abcam), Anti-GAPDH (ProSci).
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3

Placental Protein Analysis in Gestational Disorders

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Proteins were extracted from frozen placenta samples sectioned from 12 CTRL, 12 GDM, and 12 SGA patients using Hanna’s buffer containing 0.125 M Tris-HCl pH 7.5, 4% (w/v) SDS, 20% (v/v) glycerol, and 10% (v/v) β-mercaptoethanol and supplemented with 1:10 Protease Inhibitor Cocktail (Sigma-Aldrich®, Milan, Italy). Both extraction and Western blot protocol were the same as described by Lombó and colleagues [22 (link)]. The membranes were incubated with the primary antibodies: Oxidative Stress Defense (ab179843, Abcam, Cambridge, UK), anti-β-actin (#4967, Cell Signaling TECHNOLOGY®, Danvers, MA, USA), anti-CB1 (ab259323, Abcam), and anti-TRPV-1 (ab3487, Abcam), and diluted 1:1000 in blocking solution overnight at 4 °C. Then, the Goat Anti-Rabbit IgG-HRP (Sigma-Aldrich®, Milan, Italy), diluted 1:2500 for 1 h at 30 °C, was used. Eventually, Image Lab Software (Bio-Rad, Milan, Italy) was used to digitalize the chemiluminescent signal and the densitometric analysis was carried out using the Fiji ImageJ Software 1.53t.
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4

Quantifying Oxidative Stress Markers in U87 MG Glioma Cells

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The U87 MG human glioma cells were seeded in 25 cm2 flasks at the density 5 × 105 cells. Cells were treated for 30 min with 200 µM H2O2 before lysis in radioimmunoprecipitation (RIPA) buffer (150 mM sodium chloride, 1% Triton X-100, 0.5% sodium deoxycholate, 0.1% sodium dodecyl sulphate, 50 mM Tris, pH 8). Western blot analysis was performed similarly as described in [15 (link)]. Oxidative stress defense cocktail (ab179843, Abcam, Cambridge, UK) was applied to estimate the expression level of catalase, superoxide dismutase 1, thioredoxin, and smooth muscle actin in cells. Anti-β-actin antibody (ab8227, Abcam, Cambridge, UK) was determined as a housing protein. The WesternBreeze chromogenic kit anti- rabbit was purchased from ThermoFisher Scientific. The image analysis of proteins on the membrane was performed with ImageJ software. Optical densities (O.D.) of the bands were detected with ImageJ and analyzed, the normalized O.D. values are the mean values from 4 measurements and are plotted in histograms (down). Error bars represent standard deviations. The level of significant difference was calculated with one-way ANOVA: * p < 0.05, ** p < 0.01.
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5

Western Blot Analysis of Cellular Proteins

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For the Western blot experiments, cell pellets of SkMS/PCs were lysed in 8 M urea, 50 mM Tris–HCl, pH 8.0 with 1% SDS (1:1) containing protease inhibitor cocktail (Roche, Basel, Switzerland). The total protein concentration was determined using the Lowry method. A total of 50 μg of protein was separated on 4–20% Mini-PROTEAN TGX Stain-Free Protein Gels and electrotransferred under standard conditions (30 min) using Trans-Blot Turbo to a PVDF membrane (all from Bio-Rad, Hercules, CA, USA). The membrane was soaked with blocking buffer containing non-fat milk (Bio-Rad, Hercules, CA, USA). Immunodetection was performed using: the anti-forkhead box O1 (FOXO1A) antibody −70 kDa (ab52857); anti-heat shock protein70 (HSP70) antibody 1:1000, 70 kDa (ab31010); anti-myoblast determination protein 1 (MYOD) antibody 1:1000, −50 kDa; anti-oxidative stress defense (Catalase- CAT 60 kDa superoxide dismutase- SOD1 16 kDa, thioredoxin- TRX 12 kDa, smooth muscle actin- ACT 42 kDa) antibodies cocktail (ab179843) 1:200; and anti-hypoxanthine-guanine phosphoribosyltransferase (HPRT) antibody 1:1000, 25 kDa (ab109021) (Abcam, Cambridge, UK). The detection of the target protein was achieved by incubating the membrane with Clarity ECL, Western Blot substrate and analyzed with ChemiDoc XRS system (Bio-Rad, Hercules, CA, USA).
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