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Texas red dextran

Manufactured by Thermo Fisher Scientific
Sourced in United States, Germany, Switzerland

Texas Red dextran is a fluorescent dye conjugated to a dextran polymer. It is used as a molecular tracer and fluorescent label for various biological applications.

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185 protocols using texas red dextran

1

Visualizing Embryonic Dextran Percolation

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Dechorionated embryos at 50 hpf were soaked in 1X tricaine and immobilized in a 1.5% canyon mount cast filled with egg water. Texas-red Dextran (3 kDa and 70 kDa from Thermo Fisher) and AF647 conjugated α-bungarotoxin protein (aBt, Thermo Fisher ) were dissolved in 1X PBS and stored at 10 mM at −20°C and 1 mM at −80°C, respectively. The injection solution was made with 1X PBS/0.5% Phenol Red. Texas-red Dextran (either 3 kDa or 70 kDa, 500 μM ) was co-injected with AF647 conjugated aBt (Thermo Fisher, 500 μM) into the periotic space (anterior and posterior to the OV). Embryos were imaged at 2 hours post-injection. To measure the Dextran percolation in embryos treated with Chase, Texas-red Dextran (either 3 kDa, 10 kDa, or 70 kDa, 500 μM) and AF647 conjugated aBt (Thermo Fisher, 500 μM) were co-injected with Chase (10 U/mL) into periotic space, followed by imaging of OVs at 2 hours post-injection.
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2

Liposomal Texas Red Dextran Encapsulation

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Liposomes were prepared as stated above (2.2) with the difference that the final concentration was 4 mg/mL and the hydration buffer contained additionally 0.4 mg/mL Texas Red dextran (Texas Red dextran [3,000 Da, lysine fixable] was purchased from Thermo Fisher Scientific). Afterward, the loaded liposomes were purified by size exclusion chromatography using PD-10 Columns (GE Healthcare) and 10 mM acetate buffer pH 4 with 150 mM of NaCl as elution buffer.
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3

Lysosomal trafficking of Aβ oligomers

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Ovalbumin-488 was purchased from Life Technologies and reconstituted in PBS to a stock concentration of 5 mg/mL Hippocampal neurons plated on Mattek dishes were treated with Ova-488 to a final concentration of 100 μg/mL for 3 h or Aβ42-488 oligomers to 10 μM for 24 h, then 100 nM Lysotracker red (Life Technologies) was added, incubated for 1.5 h and imaged using a 100 × oil objective.
For experiments using NU1 and Texas Red-Dextran, neurons were incubated with Aβ42 oligomers for 24 h then with 0.5 mg/mL 10,000 MW Texas Red-Dextran (ThermoFisher) for 1 h. Cells were washed twice with fresh media and incubated with neuron-conditioned media for a further 3 h to chase into lysosomes. Cells were then fixed with 0.3% PFA, permeabilised with 0.025% saponin, blocked with Superblock (ThermoFisher) containing 0.025% saponin and then labelled with NU1 (courtesy of the William Klein laboratory) and goat anti-Mouse Alexa Fluor 488 conjugated secondary (Invitrogen) both diluted in wash buffer (25% Superblock in PBS) at 1:500. Coverslips were mounted in Prolong Gold containing DAPI and imaged using a Leica confocal SP8 microscope.
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4

Intravital Imaging of Tumor Vasculature

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Anesthetized LG-15 tadpoles were injected intracardiacally with 10uL of 70,000MW (25mg/mL) Texas-red dextran (Invitrogen) to label the blood vessels. Approximately 10 minutes later 15/0-collagen tumor grafts were mounted onto slides and blood vessels and tumor cells were visualized using the Olympus BX40 conventional fluorescence microscope (Olympus America Inc.), and images acquired using the Retga 1300 camera (QImaging). Two-color images (Texas-red-dextran/PKH) were combined and analyzed using Image J software (NIH). For Confocal Intravital imaging: LG-6 tadpoles were anesthetized by immersion in TMS. They were then intracardiacally injected with 10uL of 70 000MW (25mg/mL) Texas-red dextran (Invitrogen) to label the blood vessels approximately 10 minutes before imaging. Animals were stabilized for imaging in between a solidified 1% agarose matrix made inside an imaging plate. Image acquisition was conducted on an epifluoresence microscope (TE2000-U microscope; Nikon) using 4–20× objectives coupled to a Cool SNAP HQ CCD (Roger Scientific).
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5

Fluorescent Labeling for Particle Uptake

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To prepare for the Texas Red dextran-labeled cells, 5 x 104 RAW264.7 macrophages were incubated with [10 mg/mL] Texas Red dextran (Invitrogen) in 600 μL DMEM for 18 h at 37°C in 5% CO2. The Cry3Aa-GFP-labeled cells were prepared by seeding 5 x 104 RAW264.7 macrophages on an 8-well chamber slide and incubated with Cry3Aa-GFP crystals for 2.5 h at 37°C in 5% CO2. At the end of incubation, the cells were washed with PBS three times to remove excess labeling reagent. The Texas Red dextran RAW cells were then added to the Cry3Aa-GFP RAW cells and incubated for 2 h. At the end of the 2-h incubation period, cells were washed with PBS three times and fixed with 4% paraformaldehyde in PBS for 20 min at room temperature. The fixed cells were washed three times with PBS before counterstained with DAPI. Cells were washed extensively with PBS and coverslipped using Gel/Mount. For each well, multiple fluorescence images were sequentially taken using an Axioscope 40X microscope in a grid-like fashion to cover the entire cellular population. These images were then manually inspected to tabulate the number of cells containing either Texas Red dextran only, Cry3Aa-GFP crystals only, or both particles.
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6

In Vivo Imaging of Mouse Brain

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Beginning at least two weeks after surgery mice were gradually habituated to the imaging rig. Habituation reduces both excessive movement during image collection and chronic restraint stress, where the latter can influence microglial morphology [14 (link)]. In vivo images were collected 12 weeks after surgery, well after astrocytic and microglial responses to the surgery had subsided (30 days after V1 cranial window surgery for astrocytes, and after 7–10 days for microglia [15 (link)]). During imaging sessions, mice were head-fixed underneath a two-photon microscope (Scientifica, Uckfield, UK) atop of a free-moving polystyrene cylinder (Biosciences Workshop, UCL) fitted with a rotary encoder (Kubler Group, Villingen-Schwenningen, Germany) that allowed recording of voluntary running. Imaging sessions were performed in the dark. Immediately prior to imaging sessions, the vascular lumen was labelled either by intravenous injection with 2.5% (w/v) Texas Red Dextran (70 kDa, Invitrogen, Carlsbad, CA, USA) or subcutaneous injection of 2.5% (w/v) Texas Red Dextran (3 kDa, neutral, Invitrogen).
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7

In Vivo Imaging of Microglial Morphology

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Beginning at least two weeks after surgery mice were gradually habituated to the imaging rig.
Habituation reduces both excessive movement during image collection and chronic restraint stress, where the latter can influence microglial morphology (Hinwood et al., 2013) . In vivo images were collected 12 weeks after surgery, well after astrocytic and microglial responses to the surgery had subsided (30 days after V1 cranial window surgery for astrocytes, and after 7-10 days for microglia; Holtmaat et al., 2009) . During imaging sessions, mice were head-fixed underneath a two-photon microscope (Scientifica, Uckfield, UK) atop of a free-moving polystyrene cylinder (Biosciences Workshop, UCL) fitted with a rotary encoder (Kubler Group, Villingen-Schwenningen, Germany) that allowed recording of voluntary running. Imaging sessions were performed in the dark.
Immediately prior to imaging sessions the vascular lumen was labelled either by intravenous injection with 2.5% (w/v) Texas Red Dextran (70 kDa, Invitrogen, Carlsbad, CA, USA) or subcutaneous injection of 2.5% (w/v) Texas Red Dextran (3 kDa, neutral, Invitrogen).
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8

Neurotoxin Reconstitution for Visualization

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The lyophilized form of TeNT-LC and BoNT/B/D-LC was reconstituted with a solution consisting of 100 mM KCl and 300 µM 3 kDa neutral dextran-Texas red (Life Technologies Corp., Carlsbad, CA) such that the concentration of TeNT-LC and BoNT/B-LC were 0.5 µg/μL and BoNT/D-LC was 0.3 µg/μL. The fluorescent dextran-Texas red dye was used to allow visualization of neurotoxin injection. Control neurotoxin solutions were denatured in a boiling water bath for 30 min.
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9

Quantifying Endothelial Permeability Using Dextran

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Osmotic water permeability across endothelial cell layer was determined using Texas Red™-dextran (10 kDa; Molecular Probes, Eugene, OR) dilution method [62 (link)]. bEnd.3 cells were seeded at 1 × 105 cells per insert in Transwell inserts with 0.4 μm pore size (Falcon, catalog No. 353095) and incubated for 2–4 days until cell layer formation. After Au-NP treatment (500 ng/mL; 24 h), the basal and apical surface of cells was bathed in isosmolar PBS and hyperosmolar PBS (PBS with 300 mM D-mannitol) containing 0.25 mg/mL Texas Red-dextran, respectively. Cultures were placed in incubator (37 °C, 5% CO2), and 5 μl samples of dye-containing apical fluid were collected at 10, 20 and 60 min. The samples were diluted in PBS, and fluorescence was measured by Fluoroskan Ascent™ microplate fluorometer (Thermo Scientific™, Vantaa, Finland).
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10

Fluorescent Antibody and Dye Labeling

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Fluorescein-isothiocyanate (FITC) rat anti-mouse Ter-119 mAb (Clone Ter-119) and FITC rat anti-mouse Ly-6G mAb (Clone 1A8) were purchased from BD Biosciences (San Jose, CA). Rat anti-mouse Gr-1 mAb (clone RB6–8C5) was prepared from a hybridoma culture supernatant at the Lymphocyte Culture Center, University of Virginia. The Gr-1 mAb was conjugated to Alexa Fluor 546 using an antibody labeling kit from Molecular Probes, Inc. (Eugene, OR). Texas Red dextran (MW 70,000) and FITC dextran (MW 70,000) were also purchased from Molecular Probes Inc. Evans blue was purchased from Sigma Aldrich (Saint Louis, MO).
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