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Dye binding protein assay kit

Manufactured by Bio-Rad
Sourced in United States, Japan

The Dye-binding protein assay kit is a colorimetric assay used to determine the concentration of proteins in a sample. It utilizes a dye that binds to proteins, and the resulting color change is measured spectrophotometrically to quantify the protein content.

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35 protocols using dye binding protein assay kit

1

Adipocyte Differentiation Protein Analysis

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After confluence, differentiation of 3T3-L1 preadipocytes was induced in the presence or absence of the indicated concentrations of orobol as described above. Cell lysates were prepared and the protein concentration of each sample was determined. The protein concentration was measured using a dye-binding protein assay kit as described by the manufacturer (Bio-Rad Laboratories, Hercules, CA). Proteins in cell lysates were separated on sodium dodecyl sulfate polyacrylamide gel electrophoresis (SEMS-PAGE) gels and transferred onto polyvinylidene fluoride membranes (EMD Millipore, Billerica, MA). The membranes were blocked with 5% skim milk in the presence of the specific primary antibodies, followed by HRP-conjugated secondary antibodies. The protein bands were detected with a chemiluminescence detection kit (GE Healthcare, Little Chalfont, UK).
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2

Colon Tissue Homogenization and Protein Quantification

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Colon samples were homogenized in a buffer containing 150 mmol/L NaCl, 50 mmol/L Tris–HCl (pH 8.5), 2 mmol/L EDTA, 1% v/v NP-40, 0.5% w/v deoxycholate, 10 mmol/L NaF, 10 mM sodium pyrophosphate, 2 mmol/L PMSF, 2 heart leupeptin, 2 heart aprotinin, pH 7.4, using the program Protein_1 on a GentleMACS tissue Dissociator (Miltenyi Biotec)50 (link). Protein concentration in all lysates was measured by using a dye-binding protein assay kit (Bio-Rad) and a SmartSpec Plus spectrophotometer (Bio-Rad) reading at a wavelength of 595 nm. Immunoblotting was performed by using commercially available antibodies: anti-HIF-1α (mouse monoclonal, Novus Biologicals) and anti-tubulin (mouse monoclonal, Sigma-Aldrich). Secondary antibodies were purchased from Santa Cruz Biotechnology. Bands were visualized by enhanced chemiluminescence (ECL; Millipore Corporation) according to the manufacturer’s instructions, and were quantified by using densitometry (Chemidoc, Bio-Rad). Each experiment and densitometric quantification was separately repeated at least three times.
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3

Protein Quantification and SDS-PAGE Analysis

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Cells (1 × 106 cells) were plated in 6 cm dish. After treatment with KA for various periods, the harvested cells were lysed, and the supernatants were boiled for 5 min. Protein concentration was determined by using a dye-binding protein assay kit according to the manufacturer's manual (Bio-Rad, Richmond, CA, USA). Equal amounts of lysate protein were subjected to SDS-polyacrylamide gel electrophoresis. Proteins were electrotransferred to polyvinylidene fluoride membranes and were detected as described previously.[17 (link)18 (link)]
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4

Melan-a Cell Protein Expression Analysis

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Melan-a cells (1.5 × 104 cells/ml) were cultured in a 60 mm dish for 24 h. And then, DGD was treated with or without indicated concentration and time. The cell were lysed in cold lysis buffer (20 mM Tris-HCL (PH 7.5), 150 mM NaCl, 1 mM Na2EDTA, 1 mM EGTA, 1% Triton X-100, 2.5 mM sodium pyrophosphate, 1 mM glycerophosphate, 1 μg/ml leupeptin, 1 mM PMSF and a protease inhibitor). The protein concentration was determined using a dye-binding protein assay kit (Bio-Rad Laboratories Inc.), as described in the manufacturer’s manual. A 20-40 μg lysate protein was separated via 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electrophoretically transferred to a polyvinylidene fluoride membrane (Millipore Crop., USA). After blotting, the membranes were blocked with 5% non-fat skim milk in a Tris buffered saline-T buffer at 4°C overnight and incubated for 2 h with the specific primary antibodies (1:1000). After hybridization with secondary antibodies (1:5000, Santa Cruz Biotech, USA), the protein bands were visualized using an ECL plus Western blotting detection system (Amersham™, USA).
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5

UVB-Induced Protein Analysis by Western Blot

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For Western blot assay, cells (1.5 × 106 total) were cultured in a 10 cm dish for 48 hrs, followed by starvation in serum-free DMEM for 24 hrs. Cells were then treated with DHGA-D (2.5 or 5 μM) for 1 hr and irradiated with UVB (0.05 J/cm2). The protein concentration was determined by using a dye-binding protein assay kit (Bio-Rad Laboratories) following instructions in the manufacturer's manual. Lysate protein was subjected to 10% SDS-PAGE and transferred to a polyvinylidene difluoride membrane (Amersham Pharmacia Biotech). After transferring, the membranes were incubated with specific primary antibodies at 4°C overnight. Protein bands were visualized by using a chemiluminescence detection kit (Amersham Pharmacia Biotech) after hybridization with a horseradish peroxidase-conjugated secondary antibody.
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6

Western Blot Protein Quantification and Detection

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Cells were rinsed, scraped off and lysed using RIPA buffer with a protease and phosphatase inhibitor cocktail (Sigma–Aldrich, St. Louis, MO, USA). After centrifugation of the lysate, the supernatants were collected and quantified using a dye-binding protein assay kit (Bio-Rad, Hercules, CA, USA) or the Pierce BCA Protein Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA). Proteins were separated by 10% SDS-PAGE and transferred to a nitrocellulose membrane (Bio-Rad, Hercules, CA, USA). After blocking in 5% skim milk in TBS, containing 0.1% Tween 20 (TBST), corresponding antibodies were applied to membranes and incubated overnight at 4 °C. After washing with TBST, a HRP-conjugated secondary antibody was applied to the membranes and bands were visualized using Western lightning Plus-ECL (PerkinElmer, Waltham, MA, USA).
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7

Protein Extraction and Immunoblotting Protocol

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For protein extraction, pooled mesenteric arteries were lysed in a buffer containing 150 mmol/L NaCl, 50 mmol/L Tris-HCl (pH 8.5), 2 mmol/L EDTA, 1% v/v NP-40, 0.5% w/v deoxycholate, 10 mmol/L NaF, 10 mM sodium pyrophosphate, 2 mmol/L PMSF, 2 g/mL leupeptin, and 2 g/mL aprotinin, pH 7.4. Lysates were incubated on ice for 15 min and then centrifuged at 38,000× g for 30 min at 4 °C to collect the supernatant. Protein concentration was measured using a dye-binding protein assay kit (Bio-Rad) and reading to the spectrophotometer at a wavelength of 595 nm. Immunoblotting was performed as previously described [25 (link)], using the following antibodies: anti-bactin (Abcam, ab49900; mouse monoclonal, 1:4000), anti-phospho-ERK1/2 (Santa Cruz, sc-136521; mouse monoclonal 1:800), anti-AT1 receptor (Santa Cruz, sc-57036; mouse monoclonal 1:1000), anti-Rac1-GTPγ (STA-401-1, Cells Biolab Inc., 1:800). Secondary antibodies (1:3000) were purchased from Amersham Life Sciences (GE Healthcare). Bands were visualized with enhanced chemiluminescence (ECL, Amersham Life Sciences), according to the manufacturer’s instructions. Immunoblotting data were analysed using ImageJ software (developed by Wayne Rasband, NIH, Bethesda, MD, USA) to determine the density of the bands.
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8

Coimmunoprecipitation and Protein Analysis

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Cells were washed with cold PBS twice and lysed using 0.3% CHAPS buffer [40 mM Hepes (pH7.4), 120 mM NaCl, 0.5 mM DTT, and 1 mM EDTA] supplemented with protease inhibitor cocktail (Roche) and phosphatase inhibitor cocktail (Roche). The cell lysates were spun at 13,000 rpm in a microcentrifuge, supernatants were collected, and protein concentration was quantified using a dye-binding protein assay kit (Bio-Rad). Cell lysates were precleared with protein G agarose beads (GenDepot) by rocking for 30 min at 4°C and coimmunoprecipitated with appropriate antibodies at 4°C overnight. After incubation with protein G agarose beads for 2 hours at 4°C and wash with the lysis buffer, immunoprecipitated proteins were recovered from the beads by boiling in NuPAGE LDS Sample Buffer (Life Technologies). Proteins were analyzed by immunoblotting.
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9

Suppression of α-MSH-Induced Melanogenesis

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B16F10 cells (1.5 × 104) were cultured in a 6 cm dish for 48 h then starved in serum-free medium for an additional 24 h to eliminate the influence of FBS on kinase activation. HEMs (9.6 × 104) were cultured in 9 cm dish for 6 days. The culture media was replaced with the media containing 7,3′,4′-THIF (10, 20, or 40 μM) for 1 h before being exposed to 100 nM α-MSH for 3 days. The harvested cells were disrupted and the supernatant fractions were boiled for 5 min. The protein concentration was determined using a dye-binding protein assay kit (Bio-Rad Laboratories Inc.), as described in the manufacturer’s manual. Lysate protein (20–40 μg) was subjected to 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and electrophoretically transferred to a polyvinylidene fluoride membrane (Millipore). After blotting, the membrane was incubated with primary antibodies at 4°C overnight. After hybridization with secondary antibodies, the protein bands were visualized using an ECL plus Western blotting detection system (AmershamTM, Piscataway, NJ, United States). The relative intensities were quantified by Image J program.
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10

Curcumin's Effects on HCT116 Cell Cycle

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HCT116 colon cancer cells were cultured for 48 h, and in order to synchronize the cell cycle, the cells were incubated in serum free McCoy’s 5A media for 12 h. After synchronization, the cells were treated or not treated with various concentrations of curcumin for 30 min. Then the cells were disrupted with lysis buffer [10 mM Tris (pH 7.5), 150 mM NaCl, 5 mM ethylenediaminetetraacetic acid (EDTA), 1% Triton X-100, 1 mM dithiothreitol (DTT), 0.1 mM phenylmethylsulfonyl fluoride (PMSF), and 10% glycerol and protease inhibitor cocktail tablet]. The protein concentration was determined using a dye-binding protein assay kit (Bio-Rad Laboratories, Philadelphia, PA) as described by the manufacturer. The proteins were separated electrophoretically using a 10% SDS-polyacrylamide gel. After separation, the proteins were transferred to an Immobilon-P membrane (Millipore Corporation, St. Charles, MO). The membrane was blocked with 5% fat-free milk for 1 h and incubated with the specific primary antibody at 4°C overnight. After hybridization with an HRP-conjugated secondary antibody, the protein bands were detected using a chemiluminescence detection kit (GE healthcare, Pittsburgh, PA).
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