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Clontech advantage rt for pcr kit

Manufactured by Takara Bio

Clontech Advantage RT for PCR kit is a reverse transcription kit designed for cDNA synthesis in preparation for PCR. It includes reagents and enzymes necessary for converting RNA into cDNA.

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2 protocols using clontech advantage rt for pcr kit

1

Chromatin Immunoprecipitation and qRT-PCR Analysis

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ChIP experiments were carried out as previously described (6 (link), 21 (link)–23 (link)) and utilized the IRF1 antibody from Santa Cruz Biotechnology (H205, Santa Cruz, CA.). The library preparation utilized the SOLiD ChIP-seq kit and was performed according to the manufacturer’s instructions. For confirmatory ChIP assays, the following antibodies were used: H4AC (Upstate Biology, Lake Placid, NJ), H3K4me3 (Active Motif, Carlsbad, CA), and GST (Invitrogen, Camarillo, CA).
qRT-PCR was used to define quantitative differences in RNA abundance. The Clontech Advantage RT for PCR kit (Clontech, Mountain View, CA) was used to generate cDNA. Gene expression was detected by real-time PCR using the TaqMan 7900. Transcript levels were normalized to the 18S or β-actin signal.
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2

Quantitative Analysis of Prolactin and TNF-α Expression

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RNA was extracted as described previously [18 (link)] by using a PAXgene RNA kit (QIAGEN, Valencia, CA). After extraction, all RNA samples were tested for their integrity and concentration using a Bio-Rad Experion Automated Electrophoresis System (BIO-RAD, Hercules, CA). cDNAs were synthesized from total RNA extractions using a Clontech Advantage RT-for-PCR Kit (Clontech, Mountain View, CA). Prolactin expression analysis was conducted using a Bio-Rad IQ5 quantitative Real Time Polymerase Chain Reaction Detection System (BIO-RAD, Hercules, CA). GAPDH was used as an endogenous control. qRT-PCR conditions were as follows: 50°C for 2 minutes and 95°C for 10 minutes (95°C for 15 seconds, 62°C for 30 seconds, and 72°C for 30 seconds) for 47 cycles. Relative quantitation of prolactin and TNF-α mRNA expression was normalized to GADPH and fold changes were calculated using the 2−ΔΔCT method. Primers utilized for prolactin, TNF-α, and GAPDH are listed below:

Prolactin R: 5′ CGG CGC GGT CAA ACA GGT CT 3′.

Prolactin F: 5′ ACC AGG AAA AGG GAA ACG AAT GCC 3.

GAPDH-F: 5′ CCACCCATGGCAAATTCCATG 3′.

GAPDH-R: 5′ TCTAGACGGCAGGTCAGGTCC 3′TNF-alpha.

TNF-α-F: 5′-CTT CTC CTT CCT GAT CGT GG-3′.

TNF-α-R: 5′-GCT GGT TAT CTC TCA GCT CCA-3′.

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