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Alexa fluor 546 goat anti mouse igg

Manufactured by Thermo Fisher Scientific
Sourced in United States, United Kingdom, Germany, China

Alexa Fluor 546 goat anti-mouse IgG is a fluorescently labeled secondary antibody used for the detection of mouse primary antibodies in various immunoassay applications. It is composed of a goat-derived polyclonal antibody specific for mouse immunoglobulin G (IgG) that is conjugated to the Alexa Fluor 546 fluorescent dye.

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83 protocols using alexa fluor 546 goat anti mouse igg

1

Quantifying Bax and Bcl-xL Abundance in PTC

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Abundance of Bax and Bcl-xL was assessed as previously described5 (link). Briefly, 3 days old PTC were incubated with control or HG for 8 h. Cells were fixed with 4% paraformaldehyde (pH 7.4) for 10 min, permeabilized with 0.3% Triton X-100 for 10 min and blocked with 5% BSA in 0.1% Triton X-100 for 1 h. Primary antibodies mouse monoclonal anti-Bax (6A7) (5 μg/ml) (Abcam, Cambridge, UK) and rabbit monoclonal anti-Bcl-xL (54H6) (1:200) (Cell Signaling Technology, Danvers, MA, USA) were applied over night at 4 °C. Cells were washed and secondary antibodies Alexa Fluor 546 goat anti-mouse IgG (Life Technologies, Carlsbad, CA, USA) and Alexa Fluor 546 goat anti-rabbit IgG (Life Technologies, Carlsbad, CA, USA) were applied for 1 h at room temperature. Secondary antibody controls were subjected to the same treatment, but primary antibodies were omitted. Cells were imaged with a Zeiss LSM 510 confocal microscope equipped with × 63/1.4 NA oil objective. The microscope setting was kept fixed for all measurements. The Bax and Bcl-xL abundances were analyzed in Matlab (The MathWorks, Natick, MA, USA). The total abundance of Bax and Bcl-xL was calculated as the percentage of Bax or Bcl-xL (pixels) normalized to cell size (pixels). On each coverslip, at least three cells were analyzed. The control group was set to 100%.
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2

Evaluating Cellular Proliferation in Drug-Treated Cell Lines

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MGG4, MGG8, and MGG85 cells were treated with DMSO, 12.5 nM of FK866, or GMX1778 for 72 hrs, washed with cold PBS, and mounted on slides by cytospin. Cells were fixed with methanol/acetic acid (3:1) for 20 min, and permeabilized with 0.1% triton X in PBS for 5 min. After blocking with 10% goat serum in PBS, cells were incubated with Ki-67 (1:125) at 4C overnight, and then incubated with fluorophore-conjugated secondary antibody (1:200, Alexa Fluor 546 goat anti-mouse IgG, Life Technologies Corporation) at 4C for 4hr. After washing with PBS, slides were mounted with DAPI (H-1200, Vector Laboratories), and analyzed using a Fluorescent TE2000-U inverted microscope (Nikon). Microscopic images of 3 randomly chosen fields/cell line were acquired with SPOT 5.0 software, and more than 200 cells/cell line were counted with image J 1.48v. Only strongly stained cells were considered positive.
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3

Immunofluorescent Labeling of Tyrosine Hydroxylase

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Sections were cut on a freezing microtome (40 µm thickness) and were rinsed 3 times (5 min each) in PBS, then permeabilized with 3 washes (5 min each) in PBS with 0.2% Triton X-100 (Sigma-Aldrich). Sections were then quenched with 0.1 M glycine for 20 min. After that, they were placed in 10% normal goat serum (NGS, Thermoscientific) in PBS at room temperature (RT) for 1 h to block nonspecific antigens. Sections were then incubated in primary antibodies overnight at 4 °C in darkness with both chicken anti-tyrosine hydroxylase (TH) antibody (1:500, Abcam) and mouse anti-mCherry antibody (1:200, Ozyme) in PBS containing 0.1% Triton X-100 and 3% NGS. After three 5 min rinses in PBS, sections were then incubated with secondary antibodies in PBS containing 3% NGS for 1 h at RT in darkness. Secondary antibodies used in this study were Alexa Fluor 488 goat anti-chicken IgG (1:3000, Life Technologies) and Alexa Fluor 546 goat anti-mouse IgG (1:3000, Life Technologies). Then slices were washed three times (5 min each) in PBS, mounted onto slides (Superfrost) and coverslipped with fluorescence mounting medium (DAKO).
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4

Antibody Validation for Cell Signaling

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The rabbit polyclonal antibody (pAb) against β-catenin (ab6302) and the mouse monoclonal antibody (mAb) against DSG3 (3G133) were purchased from Abcam (Cambridge, UK). The mouse inhibitory mAb against E-cadherin (67A4) and the mouse mAb against cyclin E (HE12) were from Merck Millipore (Billerica, MA). The rabbit pAb against Ser127-phosphorylated YAP (#4911) and the rabbit mAb against E-cadherin (24E10) were from Cell Signaling Technology (Danvers, MA). The rabbit pAb against YAP1 (NB110-58358) was from Novus Biologicals (Littleton, CO). The mouse mAbs against β-actin (AC-15) and vinculin (hVIN-1), and the rabbit pAb against α-catenin (C2081) were from Sigma Chemical (St. Louis, MO). Mouse IgG1 for the isotype control (2E12) was from Medical & Biological Laboratories (Nagoya, Japan). Alexa Fluor 488-goat anti-rabbit IgG, Alexa Fluor 488-goat anti-mouse IgG and Alexa Fluor 546-goat anti-mouse IgG antibodies, and Alexa Fluor 546-phalloidin were from Life Technologies. Horseradish peroxidase-conjugated anti-mouse IgG and anti-rabbit IgG antibodies were from GE Healthcare (Little Chalfont, UK) and Life Technologies, respectively. The recombinant E-cadherin-Fc chimeric protein, Y-27632, iCRT3 and Verteporfin were from Sigma Chemical. Blebbistatin was from Toronto Research Chemicals (North York, Canada). The RhoA activator CN03 was from Cytoskeleton (Denver, CO).
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5

Detailed Immunostaining Protocols and Imaging Analysis

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Immunostaining was performed as described previously [8 (link)]. The following antibodies were used: rabbit anti-GFP (1:1000, Life Technologies), chicken anti-GFP (1:1000, Life Technologies), rat anti-5HT (1:100, Millipore), mouse anti-nc82 (1:20, DSHB), Alexa Fluor 488 goat anti-chicken IgG (1:1000, Life Technologies), Alexa Fluor 488 goat anti-rabbit IgG (1:1000, Life Technologies), Cy3 goat anti-rat IgG (1:200, Jackson Immunoresearch), and Alexa Fluor 546 goat anti-mouse IgG (1:500, Life Technologies). Confocal stacks with one μm optical sections were generated with a Zeiss 510 confocal microscope. The ImageJ A.1.44 software was used to analyses cell clusters, to generate Z-projections and to determine staining intensities by pixel intensities. Images were processed using Adobe Photoshop CS5/6.
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6

Immunofluorescence Staining Protocol

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The immunofluorescence staining was performed as previously described50 (link). Briefly, cells were fixed with 4% paraformaldehyde for 10 min at 4°C, treated with 0.1% Triton X-100 (Sigma) in PBS for 15 min at RT, and then incubated for 30 min at RT in protein-blocking solution consisting of PBS supplemented with 5% FBS. The samples were then incubated overnight with the following primary antibodies diluted in PBS: an anti-prolactin mouse monoclonal antibody, (QED Bioscience, San Diego, CA, USA), anti-IGFBP1 mouse monoclonal antibody (Santa Cruz Biotechnology, Dallas, Texas, CA, USA), anti-vimentin mouse monoclonal antibody, V9, (DAKO, Tokyo, Japan), and an anti-cytokeratin mouse monoclonal antibody, AE1 + AE3, (DAKO). Tissues were washed twice for 5 min in PBS and incubated with the appropriate secondary antibodies (Alexa Fluor 488 goat anti-mouse IgG, 1:600 and Alexa Fluor 546 goat anti-mouse IgG, 1:600; Life Technologies, Grand Island, NY). Nuclei were counterstained with 4′, 6-diamidino-2-phenylindole (DAPI; Biotium, CA, USA) for 30 min at RT followed by 10 final 5-min PBS washes before being cover slipped using mounting medium. Omission of primary antibodies served as a negative control.
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7

Fluorescent Antibody Labeling Protocols

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Alexa Fluor® 647 chicken anti-rabbit IgG, Alexa Fluor® 647 donkey anti-mouse IgG, Alexa Fluor® 555 donkey anti-goat IgG, Alexa Fluor® 488 donkey anti-mouse IgG, Alexa Fluor® 546 goat anti-rabbit IgG, Alexa Fluor® 546 goat anti-mouse IgG (Life Technologies, Darmstadt, Germany).
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8

Immunostaining of Caenorhabditis elegans

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Day 3 adult worms were washed using EBT buffer (1× egg buffer, 20 mM sodium azide, and 0.2% Tween 20), decapitated to extract the germ line and intestine on a coverslip, and covered with a poly-lysine–treated slide. The microscope slide was then fast-frozen on dry ice, fixed in methanol for 2 min at −20°C, and washed with PBST followed by blocking with 10% donkey serum in PBST for 30 min. Samples were incubated overnight with anti–PGL-1 antibody (1:33; DSHB, K76) or anti-ATP5A (1:100; Abcam, ab14748) at room temperature. Alexa Fluor 546 goat anti-mouse IgM (1:500; Life Technologies, 2105681) and Alexa Fluor 546 goat anti-mouse IgG (1:500; Life Technologies, 1904466) were added for 2 hours. Slides were mounted with DAPI fluoromount-G (SouthernBiotech 0100-20).
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9

Immunofluorescence Imaging of HUVEC Cells

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HUVEC were cultured on collagen-coated glass-bottom dishes (MatTek), fixed with 4% paraformaldehyde in PBS, permeabilized with 0.15% Triton X-100 for 20 minutes, and blocked with 5% donkey serum for 1 hour at room temperature. Cells were immunostained with primary antibodies at 1:330–1:1000 dilution range overnight at 4°C, washed, and incubated for 1 h at room temperature with DAPI and secondary fluorescent labeling antibodies (all at 1:2000 dilution), including Alexa Fluor 488 goat anti-mouse IgG, Alexa Fluor 546 goat anti-mouse IgG, Alexa Fluor 488 goat anti-rabbit IgG, Alexa Fluor 594 goat anti-rabbit IgG, Alexa Fluor 680 donkey anti-sheep IgG (Molecular Probes), Cy3-AffiniPure Bovine Anti-Goat IgG (H+L) (Jackson ImmunoResearch Laboratories). Cells were imaged on an IX81 inverted confocal microscope with an FV1000 camera (Olympus) using sequential line scanning. FV10-ASW 3.0 (Olympus) software was used for image capture and analysis.
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10

Immunofluorescence Imaging of C. elegans Embryos

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Embryos obtained from dissected gravid adult hermaphrodites or synchronized L1-stage larvae were placed on poly-lysine-coated glass slides, freeze-cracked with liquid nitrogen, fixed with cold methanol and cold acetone, and immunostained with primary and secondary antibodies as previously described5 (link)6 (link)8 (link). The following primary and secondary antibodies were used: rabbit anti-PGL-1 antibody5 (link) (1:4,000), rabbit anti-GFP antibody (1:400; Molecular Probes), mouse monoclonal OIC1D4 antibody that specifically recognizes PGL-1 (undiluted; Developmental Studies Hybridoma Bank), rat anti-PGL-3 antibody6 (link) (1:1,000), rabbit anti-SIR-2.1 antibody (1:500; Novus), Alexa Fluor 488 goat anti-rabbit IgG (1:500; Molecular Probes), Alexa Fluor 546 goat anti-mouse IgG (1:500; Molecular Probes), and Alexa Fluor 546 goat anti-rat IgG (1:500; Molecular Probes). The specimens were further counter stained with 1 μM TO-PRO-3 (Molecular Probes) to stain DNA. Immunofluorescence images were acquired using a confocal microscope (Olympus, FV1000 Spectral).
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