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10 protocols using histofine sab po r kit

1

Immunohistochemical Analysis of Advanced Glycation End Products in Diabetic Corneas

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The corneas removed from diabetic mice, diabetic mice that consumed pyridoxamine, age-matched wild-type mice, and young wild-type mice were fixed in 4% paraformaldehyde for 1 h. Subsequently, 5 µm-thick sections of the corneas were cut. The sections were graded, ethanol-dehydrated, and deparaffinized using xylene. Then, the sections were deparaffinized with xylene, dehydrated with graded ethanol, and immersed in PBS containing 0.2% Triton X on ice for 15 min to activate the antigen. Blocking was accomplished using a Nichirei Histofine SAB-PO (R) kit (Tokyo, Japan). The sections were treated with 10 mg/mL of AGE polyclonal antibody (bs-1158R. Bioss, Boston, MA) in PBS containing 2% BSA and incubated overnight at 4 °C. Streptavidin–biotin-peroxidase and 3,3′-diaminobenzidine tetrahydrochloride were used to visualize immunoreactivity using the Histofine SAB-PO (R) kit (Nichirei, Tokyo, Japan).
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2

Histological and Immunohistochemical Analysis of Tumor Tissues

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For light microscopic analysis, formaldehyde-fixed, paraffin-embedded tumor tissues were stained with hematoxylin and eosin (H&E) using standard techniques. Immunohistochemical staining was performed using the Simple Stain MAX-PO kit (Nichirei Bioscience), the Histofine SAB-PO (R) kit (Nichirei Bioscience) or the BenchMark GX automated slide preparation system (Ventana). The following primary antibodies were used: anti-MUC5AC (Santa Cruz Biotechnology), anti-ETV4 (Abcam), anti-CCND2 (Santa Cruz Biotechnology).
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3

Visualizing c-Fos Expression in Brain

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Immunostaining for c-Fos was performed using a Histofine SAB-PO(R) kit (Nichirei Bioscience, Tokyo, Japan), following the manufacturer’s instructions with some modifications as described previously [17 (link), 37 (link)]. After washing a series of free-floating brain sections three times with 0.1 M PBS (pH 7.4) containing 0.3% Triton X-100 (PBST), sections were blocked for 30 min with a 5% goat normal serum in PBST. Sections were then treated with rabbit polyclonal anti-c-Fos antibody at a dilution of 1:1000 (226-003; synaptic systems, Göttingen, Germany) overnight at 4°C [13 (link)]. Sections were treated with biotin-conjugated secondary antibody for 90 min and then reacted with horseradish peroxidase conjugated streptavidin for 90 min at room temperature. Immunoreactivity for c-Fos were visualized with diaminobenzidine (DAB) (Sigma-Aldrich, St. Louis, MO, USA) as a chromogen in 50 mM Tris and 0.003% H2O2. Stained brain sections were mounted on glass slides and sealed with Permount (Fisher Scientific, Waltham, MA, USA). The specificity of the staining was confirmed by omitting the primary antibody as a negative control.
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4

Immunohistochemical Analysis of Tumor Tissues

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For light microscopic analysis, tumor tissues were fixed with 3% formaldehyde, paraffin embedded, and stained with hematoxylin and eosin (H&E) using standard techniques. Antibodies used were mouse CD31 (1:100, Cell Signaling, 77699), PDGFRB (1:100, R & D Systems, BAF1042), RAB27A (1:100, Cell Signaling, 69295), SYTL2 (1:100, Santa Cruz Biotechnology, sc393847), VWF (1:100, Santa Cruz Biotechnology, sc365712), human CD31 (1:100, Abcam, ab28346), FLAG-tag (1:100, Sigma-Aldrich, F3165), aSMA (1:100, DAKO, MO851), TFE3 (1:100, Santa Cruz Biotechnology, sc5958), and NG2 (1:100, Millipore, AB5320). Heat-mediated antigen retrieval was performed in Tris-EDTA buffer at pH 6.0. Immunohistochemical staining was performed using the Simple Stain MAX-PO kit (Nichirei Bioscience), the Histofine SAB-PO (R) kit (Nichirei Bioscience).
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5

Immunohistochemical Analysis of RHAMM Expression

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The PDAC tissues were incubated with anti-RHAMM IgG (Abcam, Cambridge, MA, USA) at a 1:100 dilution for 2 h at room temperature. The sections were incubated for 10 min with biotinylated anti-rabbit antibody for RHAMM according to the manufacture's instruction of Histofine SAB-PO (R) kit (Nichirei Biosciences Inc, Tokyo, Japan). The positive control was archival tissue from a normal human testis. The scoring method, which combined intensity and the percentage of positivity, was previously described 9 (link). The slides were scored by two individual researchers (N.S. and X.C.) on a blinded basis. The extent and intensity measures for each score were combined to identify “weak” expression or “strong” expression.
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6

Immunohistochemical Detection of α-SMA

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To detect expression of α smooth muscle actin (α SMA), immunohistochemical staining was performed using a Histofine SAB-PO(R) kit (Nichirei Biosciences Inc., Tokyo, Japan) in accordance with the manufacturer’s procedure. The skin sections were immersed in 0.3% hydrogen peroxide for 15 minutes to inhibit endogenous peroxidase activity. After blocking with 10% goat normal serum, the sections were incubated with 1:200 rabbit polyclonal anti-human αSMA antibody (ab5694, Abcam) and preimmune rabbit immunoglobulin G for 1 hour at 37°C. After washing with PBS, the sections were incubated with biotin-conjugated anti-rabbit immunoglobulin G for 15 minutes at room temperature. After washing with PBS, they were incubated with peroxidase-conjugated streptavidin for 10 minutes at 37°C. The immunoreactions were visualized using a histofine DAB substrate kit (brown; Nichirei Biosciences Inc.) and counterstained with hematoxylin.
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7

Immunohistochemical Analysis of Dental Pulp Cell Cultures

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An immunohistochemical examination was carried out to analyze the biological characteristics of the cells in the dental pulp tissues cultured using the improved CMDPT. The sections were deparaffinized with xylene, rehydrated in descending concentrations of ethanol, and washed in PBS. After antigen retrieval in a 0.01 mol/L sodium-citrate-buffered solution (pH 6.0) at 98 °C for 45 min, the sections were cooled and washed well with PBS. Endogenous peroxidase was blocked by treatment with 3% H2O2 in methanol for 1 h at room temperature (RT). After treatment with 10% normal goat serum at RT for 10 min, the sections were incubated with rabbit anti-Ki-67 antibody (Abcam, Cambridge, UK) (diluted 1:200 in PBS containing 1% bovine serum albumin) or rabbit anti-stromal cell-derived factor-1(SDF1) antibody (Abcam, Cambridge, UK) (diluted 1:1000 in PBS containing 1% bovine serum albumin) at 4 °C overnight. After washing with PBS, the localization of each molecule was determined using a Histofine SAB-PO (R) kit (Nichirei Biosciences, Inc., Tokyo, Japan) and 3, 3′-diaminobenzidine (DAB) substrate kit (Nichirei Biosciences, Inc.). The sections were counterstained with hematoxylin and mounted. The specificity of the immunoreaction was confirmed by incubation with normal rabbit IgG instead of primary antibody.
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8

Immunohistochemical Analysis of MMP-1, MMP-3, and IL-6

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Paraffin-embedded ACLs were sectioned longitudinally (5 μm thick). In order to perform the staining procedure, first these sections were deparaffinized, rehydrated, and then antigen retrieval was accomplished by 10 mM citrate buffer at 60 °C for 1 h. These sections were incubated with rabbit primary antibodies against MMP-1 (1:100), MMP-3 (1:50), or IL-6 (1:400) at 4 °C overnight, rinsed with phosphate-buffered saline, and incubated with reagents included in the Histofine SAB-PO(R) kit (Nichirei Biosciences Inc., Tokyo, Japan). All sections were visualized using the Olympus BX53 microscope (Olympus, Tokyo, Japan); images were captured digitally using the Leica DFC7000 T digital camera and processed using the Leica Application Suite Ver4.6 imaging software. The primary antibodies used were rabbit anti-MMP1 antibody (1:100, ab52631, lot: GR3261996-3; Abcam, Cambridge, UK), rabbit anti-MMP3 antibody (1:50, ab52915, lot: GR3249690-2; Abcam), and rabbit anti-IL-6 antibody (1:400, ab6672, lot: GR3195128-25; Abcam). The acquired images were analyzed using ImageJ Fiji (https://imagej.net/software/fiji/). Color deconvolution in ImageJ Fiji was used to separate the 3,3′-diaminobenzidine staining, and the mean gray values in the nucleus and cytoplasm were measured and quantified.
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9

Immunohistochemical Staining of YAP1

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Immunohistochemistry was performed according to the method described in our previous report [44 (link)]. Briefly, an anti-YAP1 antibody (HPA070359; Sigma-Aldrich), a Histofine SAB-PO(R) kit, and 3, 3′-diaminobenzidine substrate-chromogen (Nichirei, Tokyo, Japan) were used.
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10

Immunohistochemical Analysis of TP53 in PMCA and DPAM

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Histological diagnosis was performed with all the tissue samples obtained by surgical resection and finally classified into PMCA and DPAM. Presence of signet ring cells was judged positive if the cells were observed at any percentages in the tumorous components but not in isolated mucin pools. Tissue sections of the 18 tumors were further analyzed by immunohistochemical staining with anti‐TP53 antibody (sc‐126, Santa Cruz Biotechnology, Inc., Delaware, CA), Histofine SAB‐PO(R) Kit (Nichirei, Tokyo, Japan), and ImmPACT DAB systems (VECTOR LABORATORIES, Burlingame, CA). Expression of TP53 was scored into three classes, namely normal, negative, and excessive, according to previous reports 6, 7. Normal staining referred to a weak focal nuclear staining, resembling a staining pattern for normal epithelium in less than 50% of tumor nuclei. A negative score indicated a complete lack of stained tumor nuclei (even though stromal cell nuclei showed normal pattern). The staining was classified as excessive if a strong nuclear staining was present in the majority of tumor cells (>50%).
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