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4 protocols using anti cd3 hit3a

1

Cytokine Induction in PBMC and CBMC

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We performed the cytokine induction protocol as previously described (24 (link), 25 (link)). In brief, adult peripheral blood mononuclear cells (PBMCs) and cord blood mononuclear cells (CBMCs) (2 × 106 cells/mL) were stimulated with or without purified phytohemagglutinin (PHA) (10 µg/mL), or 1 µg/mL anti-CD3 (HIT3a, Cat. #300314, BioLegend, San Diego, CA, USA) in combination with 1 µg/mL anti-CD28 (CD28.2, Cat. #302914, BioLegend), in 1-cm tissue culture plates with l-arginine-free medium (SILAC R1780 SIGMA, RPMI-1640 Medium) supplemented with 10% heat-inactivated fetal bovine serum, 1 mM glutamine, 1 mM sodium pyruvate, 50 mg/L l-leucine, 40 mg/L l-lysine, and 1× non-essential amino acids (Gibco cat. # 11140-035), 100 IE/mL penicillin, and indicated l-arginine (Sigma-Aldrich, St. Louis, MO, USA). After 72 h, cell-free culture supernatants were collected and assayed for cytokine production by enzyme-linked immunosorbent assay: TGF-β1 (R&D systems Inc., MN, USA) and IL-10 (R&D Systems).
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2

Allogeneic T Cell Suppression Assay

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MO-DCs were matured as above with 10ng/ml IL-6, 0.1μM PGE2 and 10ng/ml IL-1β, 100ng/ml IL-36α and then on day 10, were incubated with 200,000 allogeneic CD4+ T cells at ratios of 1:20 and 1:100 for 5 days in round-bottomed 96-well culture plates (NUNC). In some cases T cells were pre-labeled with CFSE (Invitrogen) before culture as directed by manufacturer. Cells were stained with anti-CD3 (HIT3a, Biolegend) for 20 min at 4°C then treated with 200μl of 1μg/ml DAPI (Invitrogen) in PIPES buffer for 10 min at room temperature. Cells were analyzed by flow cytometry gating on lymphocytes with the DAPI detection channel set for linear detection.
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Isolation and Activation of MAIT Cells

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MAIT cells were isolated from PBMC prepared from buffy coats of healthy donors, as previously described16 (link). Briefly, monocytes and CD4 T cells were sequentially depleted from PBMC by adhesion on polystyrene culture flasks for 3 h at 37 °C, and anti-CD4 microbeads (Miltenyi Biotech, France), respectively. Vα7.2+ cells were isolated from the non-monocyte and non-CD4 PBMC fraction, using an anti-Vα7.2+ antibody conjugated to FITC, followed by a positive selection with anti-FITC microbeads (Miltenyi Biotech, France) and used as enriched MAIT cells for co-culture experiments. The purity of isolated Vα7.2+ cells was >80% and >95% of the isolated Vα7.2+ cells were co-expressing CD161. More than 95% of the isolated CD161hi Vα7.2+ cells were positive to APC-conjugated 5-OP-RU-loaded MR1 tetramers45 (link) (NIH Tetramer Core Facility, Emory University Vaccine Center, Atlanta, USA) (Supplementary Fig. 3). MAIT cells added in co-culture experiments were either left nonactivated or were activated using anti-CD3 (HIT3a) at 2.5 μg/ml, soluble anti-CD28 (CD28.2) (1 μg/ml), and IL-7 at 10 ng/ml (BioLegend)21 (link).
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4

Activation and Polarization of Immune Cells

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Human primary Th cells and Jurkat cells were cultivated in RPMI-1640. In some experiments, Th and Jurkat cells were stimulated with 2.5 μg/ml of plate-bound anti-CD3 (Hit3a, Cat. # 300314, BioLegend, San Diego, CA, USA) and 2 μg/ml of soluble anti-CD28 (CD28.2, Cat. # 302914, BioLegend) in the presence of IL-2 (50 unit/ml) for an indicated amount of time. Human colonic adenocarcinoma cell line HT-29 cells (HTB38, ATCC) and human embryonic kidney cells 293 T were cultivated in McCoy’s 5A medium (Gibco, Grand Island, NY, USA) and Dulbecco’s modified Eagle’s medium (DMEM), respectively. Primary human macrophages were stimulated with lipopolysaccharide (LPS) (1 μg/ml, InvivoGen, San Diego, CA, USA) along with human interferon-gamma (hIFN-γ) (50 ng/ml, PeproTech, Rocky Hill, NJ, USA) for 24 hours for M1 polarization or hIL-4 (25 ng/ml, PeproTech) along with hIL-13 (25 ng/ml, PeproTech) for 24 hours for M2 polarization.
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