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4 protocols using anti α syn antibody

1

Immunohistochemical Analysis of Neuroinflammation

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For immunohistochemistry (IHC), the brains were separated in PFA solution at 4°C overnight and embedded with 3% agarose in PBS. Coronal sections were gathered using VT1000 vibratome (Leica Biosystems, Wetzlar, Germany) at a thickness of 30 μm throughout the brain, including the SNpc and striatum and every 3 sections were analyzed. 3% H2O2 was used to block endogenous peroxidase activity for 10 min at room temperature and sections were blocked with 10% donkey serum for 10 min. For immunofluorescence (IF), sections were blocked with 10% donkey serum for 30 min. Then, the sections were incubated with primary antibody. The sections were incubated with an HRP-conjugated anti-rabbit antibody, stained using the DAB kit (Vector Labs, Carlsbad, CA, USA), and were incubated overnight at 4°C. Fluorescein was combined with a fluorescent secondary antibody. Images were gathered using a fluorescence microscope (Olympus, Tokyo, Japan). The quantifications were performed using ImageJ. The following antibodies were used: anti-Iba1 antibody (Cat# ab5076, Abcam), anti-GFAP antibody (G3893, Sigma-Aldrich, St Louis, MO, USA), anti-α-syn antibody (Cat# ab212184, Abcam), anti-pSer129-α-syn antibody (Cat# ab51253, Abcam), Goat anti-rabbit antibody (Cat# ab6721, Abcam), donkey anti-mouse antibody (Cat# A21203, Invitrogen, Carlsbad, CA, USA), donkey anti-goat antibody (Cat# A32758, Invitrogen).
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2

Quantification of Alpha-Synuclein Protein

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The protein was isolated from SH‐SY5Y cells using RIPA buffer containing protease inhibitor cocktail (Sigma), and aliquots containing 40 μg of total protein were separated into 12% SDS gel and transferred onto 0.45 μm PVDF. After blocking in 5% nonfat milk, the membranes were then incubated overnight with the following primary antibodies: anti‐α‐syn antibody (Abcam) and anti‐β‐actin antibody (Abcam). The secondary antibodies conjugated with horseradish peroxidase were used. The detection of the proteins was carried out by BCA Protein Assay Kit (Thermo) according to the manufacturer's instruction. The proteins were visualized by ECL chemiluminescence and exposed to X‐ray film. All experiments were performed in duplicate and repeated three times.
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3

Western Blot Analysis of Brain Proteins

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Mice were sacrificed to collect the brain and frozen at -80°C. Brain tissues were lysed, and centrifuged at 12000 rpm and 4°C for 20 min to obtain the total protein in the supernatant. The protein concentrations were estimated by the bicinchoninic acid (BCA) protein assay kit (Thermo Scientific Rockford, IL, USA). Then, the protein was boiled in sodium dodecyl sulfate (SDS)-loading buffer at 95°C for 10 min to denature. The appropriate amount of protein was run on a 10% SDS-polyacrylamide gel electrophoresis (SDS-PAGE), transferred to 0.22 μm polyvinylidene fluoride membranes, and the membranes were blocked with 5% fat-free milk at room temperature for 1 h. The membranes were incubated at 4°C overnight with primary antibodies and incubated at room temperature for 1 h with the HRP-conjugated secondary antibody. Finally, an enhanced chemiluminescence reagent (Thermo Scientific Rockford) was used to develop the blots with a gel image system (Bio-Rad, CA, USA), and the analysis is performed by using ImageJ 1.49v (National Institutes of Health, USA, https://imagej.en.softonic.com/). The following antibodies were used: anti-TH antibody (Cat# ab112, Abcam, Cambridge, MA, USA), anti-β-actin antibody (Cat# 8457S, Cell Signaling Technology, Berkeley, CA, USA), anti-α-syn antibody (Cat# ab212184, Abcam), goat anti-rabbit antibody (Cat# ab6721, Abcam),.
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4

Native PAGE Analysis of αSyn Aggregation Modulation

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10 µM αSyn PFF was incubated in the absence or presence of 20 µM Gal3 in PBS in quiescence overnight at 37 ℃. After incubation, the insoluble protein fraction was separated by centrifugation at maximum speed (16900 g for 30 min) using a benchtop centrifuge and loaded on Native PAGE (Thermo Fisher Scientific, Walthan, MA, USA) according to the manufacturer's instructions. The samples were diluted at a 1:1 ratio in 2X Native PAGE sample buffer (100 mM Tris–HCl, 100% Glycerol, 0.00025% Bromophenol blue, pH 8.6) and were transferred onto a 0.45-µm nitrocellulose membrane for 7 min at 20 V with the i-Blot 2 (Thermo Fisher Scientific). The membrane was later blocked in PBS-0.1% Tween (PBS-Tw) and 5% non-fat milk overnight at 4 ℃ under constant shaking. The membrane was then incubated overnight in 1:1000 anti-αSyn antibody (Abcam) in PBS-Tw at 4 ℃ under constant shaking. Later, the membrane was washed 3 times in PBS-Tw for 10 min and then incubated in 1:5000 Alexa Fluor 555 goat anti-rabbit IgG (H + L) (Invitrogen, Thermo Fischer Scientific), in PBS-Tw at RT for 1 h. Following three further washes for 10 min each in PBS-Tw, the membranes were detected with the appropriate laser using a Typhoon FLA 9500 scanner (Amersham, UK).
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