The largest database of trusted experimental protocols

3 protocols using percoll plus gradient

1

Isolation and Characterization of Thymic Epithelial Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
mTEC subsets were isolated as previously described54 (link),55 (link). Thymi were dissected, capsules incised and triturated with glass pipettes to release thymocytes from stromal fragments. Stroma were digested with Liberase TM (Roche) and DNase I (Roche), and TECs were enriched using α-CD45 MACS microbeads (Miltenyi) or centrifugation on a Percoll PLUS gradient (GE Healthcare). Enriched TECs were stained with flurochrome-conjugated antibodies (BioLegend) against CD45 (30-F11), Ly-51 (6C3), MHC-II I-A/I-E (M5/114.15.2) and EpCAM (G8.8) along with fluorescein labeled UEA-I (Vector Labs) and DAPI (Life Tech). Thymocytes were stained with antibodies against TCRβ (H57–597), CD4 (RM4–5), CD8 (53-6.7), CD25 (PC61) and CD69 (H1.2F3). Spleen and lymph nodes were isolated, minced and stained with antibodies against TCRβ, CD4, CD8, CD25, CD44 (IM7) and CD62L (MEL-14). Intracellular staining for Aire (5H12) and Foxp3 (FJK-16s) were performed using the eBiosciences Foxp3 staining kit. All antibody stainings were preceded by FcγR block (2.4G2). Cell sorting was performed on FACS Aria II (BD), data collected using LSR II flow cytometer (BD) and analyzed using FACS Diva (BD) and FlowJo (Tree Star).
+ Open protocol
+ Expand
2

Isolation and Characterization of Thymic Epithelial Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
mTEC subsets were isolated as previously described54 (link),55 (link). Thymi were dissected, capsules incised and triturated with glass pipettes to release thymocytes from stromal fragments. Stroma were digested with Liberase TM (Roche) and DNase I (Roche), and TECs were enriched using α-CD45 MACS microbeads (Miltenyi) or centrifugation on a Percoll PLUS gradient (GE Healthcare). Enriched TECs were stained with flurochrome-conjugated antibodies (BioLegend) against CD45 (30-F11), Ly-51 (6C3), MHC-II I-A/I-E (M5/114.15.2) and EpCAM (G8.8) along with fluorescein labeled UEA-I (Vector Labs) and DAPI (Life Tech). Thymocytes were stained with antibodies against TCRβ (H57–597), CD4 (RM4–5), CD8 (53-6.7), CD25 (PC61) and CD69 (H1.2F3). Spleen and lymph nodes were isolated, minced and stained with antibodies against TCRβ, CD4, CD8, CD25, CD44 (IM7) and CD62L (MEL-14). Intracellular staining for Aire (5H12) and Foxp3 (FJK-16s) were performed using the eBiosciences Foxp3 staining kit. All antibody stainings were preceded by FcγR block (2.4G2). Cell sorting was performed on FACS Aria II (BD), data collected using LSR II flow cytometer (BD) and analyzed using FACS Diva (BD) and FlowJo (Tree Star).
+ Open protocol
+ Expand
3

Isolation and Purification of Intestinal Epithelial Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Colonic surgical specimens were collected and processed immediately after surgical resection, as previously described [20] . Briefly, specimens were opened longitudinally, rinsed and examined for macroscopic morphological alterations, and representative full-thickness samples were obtained. Intestinal mucosa was stripped from the muscularis mucosa, cut into strips and washed in Hank's Balanced Salt Solution (HBSS; Invitrogen/GIBCO) containing 10 mM DTT (Sigma-Aldrich) in order to remove mucus. IEC were isolated by repeated incubations in HBSS containing 1 mM EDTA (Sigma-Aldrich). A 40% Percoll Plus gradient (GE Healthcare), where the IEC was equilibrated at the interface, was used in order to remove mononuclear, red blood and dead cells; resulting preparations enriched for IEC were collected and washed twice in PBS, and subsequently counted. Cell preparations were stained by means of an immunoperoxidase method, with an anti-keratin mAb and a monoclonal antibody directed against a leukocyte common Ag (CD45), resulting in a <1% contamination of epithelial cell preparations by LPMC.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!