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3 protocols using cd28 percp cy5

1

Profiling CMV- and IAV-specific CD8+ T cells

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The procedure of flow cytometric analysis of CMV- and IAV-specific CD8+ T cells prior to and post in vitro stimulation was described [40 (link)]. Briefly, freshly PMBCs were stained with fluorescently labeled dextramers or tetramers specific to CMV-pp65 (NLVPMVATV) and IAV-M1 (GILGFVFTL) (Immudex, Copenhagen, Denmark and NIAID tetramer core) first at room temperature for 20 min; followed by staining of cell surface markers including antibody against CD3, CD8, CD62L, CD45RA, CD95, CD27, CD28 CD70, CD127, and CD69 at 4°C for 30 min. Cells were washed again with FACS buffer (Hanks solution with 0.3% Sodium Azide), and then fixed immediately with 3% formaldehyde and 1% FBS in FACS buffer. Fixed cells were further stained with intracellular markers (perforin and granzyme B) at 4°C for 30 min. Stained cells were collected by BD_Symphony and were analyzed using FlowJo version 7.6.5 software.
Antibodies (CD3-BV570, CD62L-FITC, CD62L-PE-Cy7, CD45RA-PE-Cy7, CD45RA-APC, CD95-PE-Cy5, CD27-PE, CD28-BV785, CD28-PerCP-Cy5.5, CD70-PE, CD127--BV711, CD69-BV650, and granzyme B) were purchased from Biolegend, and antibodies against CD8-BUV496, CD27-BUV395, and perforin-PE-CF594 were purchased from BD.
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2

Multiparametric Phenotyping of PBMCs

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Standard extracellular staining was performed on PBMCs using the following fluorophore-labeled antibodies: CD14/CD19-V500 (BD Pharmingen), (Biolegend), CD8-BV786 (BD Pharmingen), CD28-PerCP-Cy5.5 (Biolegend), CCR7-PE-Cy7 (Biolegend), CD25-APC (Biolegend), CD45RA-qDot655 (Life Technologies), and CD4-APC-H7 (BD Pharmingen).
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3

Multiparameter T Cell Phenotyping

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Blood samples were drawn from patients following permission and processed at the University of Arizona Biorepository Laboratory. Peripheral blood mononuclear cells were cryopreserved for future analysis. A complete blood count was performed using an Ac-T 5diff CP machine (Beckman Coulter, Pasadena, CA). Cryopreserved PBMC (1–2x106/sample) were stained with LIVE/DEAD Fixable Dead Cell Stain-AQUA (Invitrogen) and T cell markers in various combinations.11 (link)
The following mAbs were used to differentiate T cell subsets: CD3—BV570 (BioLegend), CD4—APC (eBioscience), CD8β—ECD (Beckman Coulter), CD95—BV421 (BioLegend), CD28—PerCp/Cy5.5 (BioLegend), CCR7—FITC (BD Pharmogen), CD45RA—BV605 (BioLegend), CD57—BV570 (BioLegend), IFN-γ—APCe780 (eBioscience). Cells following various combination and incubations as described in our previous study,11 (link)
were analyzed on the BD LSR II instrument using DiVa acquisition (BDIS, Mountain View, CA) and the FlowJo analysis software (TreeStar Inc., Ashland, OR).
Twenty (20) of 37 patients in this study completed the entire cell surface analysis.
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