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7 protocols using anti β actin antibody

1

Western Blot Analysis of EZH2 Protein

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Cells were lysed using RIPA Buffer (FUJIFILM Wako Pure Chemical Corporation) containing Protease Inhibitor Cocktail (Promega, Madison, WI, USA). The supernatant was harvested, and protein content was measured using the Protein Assay Rapid Kit WAKO II (FUJIFILM Wako Pure Chemical Corporation). The proteins were separated via sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) on 7.5% TGX FastCast Acrylamide Kit gels (Bio-Rad Laboratories, Inc., Hercules, CA, USA) and electroblotted onto Immobilon-P polyvinylidene difluoride membranes (Merck KGaA, Darmstadt, Germany). The membranes were incubated overnight with anti-EZH2 antibody (Cat. No. 612667, BD Biosciences, Franklin Lakes, NJ, USA) and anti-β-actin antibody (Cat. No. A2228, Merck KGaA) at 4 °C, followed by incubation with biotin-conjugated secondary anti-mouse antibody (Nichirei Biosciences Inc., Tokyo, Japan) followed by the horseradish peroxidase-conjugated avidin-biotin reaction (Nichirei Biosciences Inc.). Immunoreactive bands were visualized using an enhanced chemiluminescence substrate (GE Healthcare UK Ltd, Buckinghamshire, UK). Western blot images were obtained using a ChemiDoc Touch imaging system (Bio-Rad Laboratories, Inc.) and analyzed using Image Lab 5.2 (Bio-Rad Laboratories, Inc.).
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2

Western Blot Protein Quantification

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30 μg protein was firstly separated with 12 % SDS-PAGE, then transferred on the polyvinylidene fluoride (PVDF) membrane. After blocked, filter was incubated by the primary antibody. The secondary antibody (Santa Cruz Biotechnology, California, CA) was applied onto the filter at 1:2,000 dilutions. Samples were probed with antiβ-actin antibody (BD Biosciences, San Jose, CA) as an internal control. We used ECL system (Amersham, Buckinghamshire, UK) to visualize bands, and the Bandscan software (Glyko, Novato, CA) for the analysis of signal intensity.
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3

Western Blot Analysis of Protein Samples

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Equal amounts of protein samples were mixed with 5× sample buffer and boiled for 5 min, separated on SDS-polyacrylamide gels, and then transferred to PVDF membrane. The membranes were blocked in 5% BSA for 1 h at room temperature, and incubated with primary antibodies overnight at 4°C. Anti-phosphotyrosine (4G10) antibody (Millipore, Billerica, MA), antibodies against C1GALT1, GAPDH, FGFR2 (Santa Cruz Biotechnology, Santa Cruz, CA), anti-p-ERK1/2, anti-ERK1/2 andibodies (Cell Signaling Technology, Danvers, MA) and anti-β-actin antibody (BD Pharmingen, San Jose, CA) were used. The blots were then incubated with secondary antibody conjugated with horseradish peroxidase and immunoreacted bands were detected by ECL reagents and exposed on x-ray film.
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4

VCAM-1 Expression in Cancer Cells

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HCC70 and MDA-MB-231 cells were treated or not with TNF-α (50 ng/mL) for 18 h. Total proteins were extracted with RIPA buffer. Proteins were separated by 7.5% denaturing SDS-PAGE and transferred onto a nitrocellulose membrane. The membrane was incubated with the anti-VCAM-1 antibody (1/2000; Rabbit anti-VCAM-1, ab134047 Abcam®, Cambridge, UK). As a loading control, the membrane was probed with an anti-β-actin antibody (1/10,000; Beckton Dickinson). Revelation was assessed using the chemiluminescence ECL kit (BioRad). Bands were quantified by densitometry using ImageJ software.
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5

Quantitative Western Blot Analysis of TLR4 and NF-κB

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Protein lysates were prepared from different experimental groups of cells and tissues and quantified with the bicinchoninic acid (BCA) kit (Wuhan Boster Biological Technology Co., Ltd. Wuhan, China) according to the manufacturer’s instructions. Then, equal amounts of protein (30 µg) were separated by 10% polyacrylamide gel electrophoresis (PAGE) (Wuhan Boster Biological Technology Co., Ltd. Wuhan, China) at 100V for 2 h and transferred onto PVDF membranes at 100V for 1 h. Then, after blocking the membrane with 5% skimmed milk in 1X TBST buffer, the blots were incubated overnight at 4°C with anti-TLR4 (ab30667) and anti-NF-κB (ab31432) antibodies (both from Abcam Inc., Cambridge, MA, USA; 1:1000 dilution) as well as anti- β-actin antibody (Becton, Dickinson and Company, NJ, USA; 1:3000) as internal control. Then, after washes with 1X TBST, the blots were incubated at room temperature with HRP-conjugated secondary antibodies for 2 h. After washing, the blots were developed with ECL chemiluminescence reagent and imaged with a Gel Doc EZ Imager (Bio-Rad Laboratories, Inc. CA, USA). The grey values of the protein bands were quantified with the Image J software.
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6

Western blotting protocol for PDZK1 detection

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Western blotting (WB) was performed as previously described (Zheng et al., 2010a (link), Zheng et al., 2010b (link)). Anti-PDZK1 and anti-β-actin antibodies were purchased from BD Biosciences (Cat# 612660, RRID: AB_399904, San Jose, CA) and Sigma–Aldrich (Cat# A5441, RRID: AB_476744, St. Louis, MO), respectively. HRP-conjugated secondary antibody was purchased from Amersham Biosciences (Cat# NA931 RRID: AB_772210, Little Chalfont, UK). The blots were quantified using NIH Image 1.62 program. The protein level was normalized with β-actin.
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7

Western Blot Analysis of Cell Signaling Proteins

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The proteins were extracted from the whole cell lysates using RIPA cell lysis buffer and the protein concentration was determined. In total, 20 μg of the extracted total cellular protein from each sample were separated via SDS-PAGE, and transblotted onto EMD Millipore Immobilon™-P PVDF Transfer Membranes (EMD Millipore Cat No.: IPVH00010, USA). Western blot analyses were conducted with the following antibodies: mouse monoclonal anti-CD109 (Cat. No. 556039, BD Biosciences), anti-fibronectin (Cat. No.610078, BD Biosciences), anti-β-actin antibodies (Cat. No. sc-47778, Santa Cruz Biotechnology), rabbit polyclonal anti-Snail (Cat. NO. ab5351, abcam), anti-twist (Cat. No. ab505181; abcam), anti-Sox2(Cat. No: ab137385, abcam), and anti-Slug (Cat. No. 9585 S Cell signaling).
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