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Tris glycine sds gradient gels

Manufactured by Bio-Rad

Tris-Glycine SDS gradient gels are precast polyacrylamide gels used for the separation of proteins based on their molecular weight. They provide a gradient of polyacrylamide concentration, allowing for effective separation of a wide range of protein sizes. These gels are designed for use in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) applications.

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2 protocols using tris glycine sds gradient gels

1

Immunoprecipitation of GFP- and MBP-tagged proteins

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Infiltrated leaves expressing the protein of interest were powdered in a mortar under liquid N2. About 2 g of tissue was weighed, and to it, 3 volumes of lysis buffer (50 mM Tris-Cl pH 7.4, 150 mM KCL, 1% Triton X100, Protease inhibitor 1 X [Roche], NEM 20uM) were added. The supernatant was collected after a spin at 16000g for 30 min and incubated with GFP-Trap (Chromtek) or MBP magnetic beads (NEB) for 3 h at 4 °C. Beads were magnetically separated from the lysate and washed 5 times in wash buffer (50 mM Tris-Cl, pH 7.4; 150 mM KCL, 1 mM PMSF) until the green colour completely disappeared. The final pull-down beads were transferred to a 1.5-ml tube and again washed twice with wash buffer. The 3X SDS sample dye was added to the beads, and the sample was heated at 70 °C for 10 min. The pull-down products were resolved in 4–20% Tris-Glycine SDS gradient gels (Bio-Rad). IP beads used are listed in Additional file 2: Table S4.
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2

Immunoprecipitation of GFP-tagged Proteins

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Infiltrated leaves expressing the protein of interest were powdered in a mortar under liquid N 2 . About 2 g of tissue was weighed, and to it, 3 volumes of lysis buffer (50 mM Tris-Cl pH 7.4, 150 mM KCL, 1 % Triton X100, Protease inhibitor 1 X [Roche], NEM 20uM) was added. The supernatant was collected after a spin at 16000 g for 30 min and incubated with GFP-Trap (Chromtek) or MBP magnetic beads (NEB) for 3 h at 4°C. Beads were magnetically separated from the lysate and washed 5 times in wash buffer (50 mM Tris-Cl, pH 7.4; 150 mM KCL, 1 mM PMSF) until the green colour completely disappeared. The final pull-down beads were transferred to a 1.5 ml tube and again twice with wash buffer. The 3X SDS sample dye was added to the beads and the sample was heated at 70°C for 10 min. The pull-down products were resolved in 4-20 % Tris-Glycine SDS gradient gels (Bio Rad). IP beads used are listed in Supplemental Table 2.
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