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2 protocols using gentamycin

1

Antimicrobial Resistance Profiling of E. coli

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A total of 67 isolates were selected which included one representative E. coli isolate per product type found from each supplier and tested further for antimicrobial resistance or susceptibility against seven antibiotic classes using the Kirby-Bauer disk diffusion technique (Clinical Laboratory Standard Institute [CLSI], 2018). The antibiotics included ampicillin (10 µg), amoxicillin-clavulanic acid/augmentin (20 µg/10 µg), amoxicillin (10 µg), trimethoprimsulfamethoxazole/cotrimoxazole (1.25 µg/23.75 µg), cefoxitin (30 µg), cefepime (30 µg), imipenem (10 µg), neomycin (10 µg), tetracycline (30 µg), gentamycin (10 µg), and chloramphenicol (30 µg) (Mast Diagnostics, Randburg, South Africa ) (CLSI, 2018) . Break points measured were compared to those outlined by the CLSI (2018) for Enterobacteriaceae. Isolates resistant to three or more antimicrobial classes were regarded as multidrug resistant. Escherichia coli ATCC 25922 was included as a control (CLSI, 2018).
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2

Comprehensive Antibiotic Susceptibility Testing

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Antibiotic susceptibility testing was performed for 17 drugs covering all the nine antimicrobial categories comprising aminoglycosides, ansamycins, fluoroquinolones, folate pathway inhibitors, tetracyclines, glycopeptides, oxazolidinones, macrolides and incosamidesl were determined using the disc diffusion susceptibility test according to clinical and laboratory standards institute (CLSI) guidelines. Commercial antibiotic discs of rifampin (5 μg), linezolid (30 μg), ciprofloxacin (5 μg), levofloxacin (5 μg), minocyclin (30 μg), doxycycline (30 μg), tetracycline(10 μg), gentamycin (10 μg), tobramycin (10 μg), amikacin(1 μg), erythromycin(15 μg), azithromycin (15 μg), clarithromycin (15 μg),clindamycin (2 μg) trimethoprim/sulfamethoxazole (1.25/23.75 μg),(MAST Diagnostics, Merseyside UK) were used in disc diffusion test. Then, MDR/XDR/PDR phenotype of these isolates was established according to the results obtained from the disc diffusion test. Briefly, multidrug-resistance (MDR) was defined as resistance to at least three or more different classes, extensive drug-resistance (XDR) was defined as resistance to at least one agent in all but two or fewer antimicrobial categories and pan drug-resistance (PDR) was defined as resistance to all agents in all antimicrobial categories.16,17
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