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4 protocols using vitamin k1

1

Anaerobic Growth of Gut Bacteria

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All bacteria were grown anaerobically (85% N2, 10% CO2, 5% H2) at 37 °C in a modified Brain Heart Infusion (BHIS-YE) medium. This medium contains 37 g/L Brain Heart Infusion (BD Biosciences) supplemented with 5 mg/L of hemin, 2 mg/L of vitamin K1, and 5 g/L of yeast extract. Solid agar plates were prepared by combining Brain Heart Infusion, yeast extract, and 15 g/L agar and then autoclaving for 30 min at 121 °C. Once cooled, the agar was supplemented with hemin (5 μg/mL) (MilliporeSigma) and vitamin K1 (1 μg/mL) (Alfa Aesar) and plates were poured. For liquid media only (BHISG-YE), dextrose was added to a final concentration of 100 mM to promote biofilm formation and MgSO4 and CaCl2 was added to a final concentration of 1 mM to promote phage adhesion [52 (link)]. All components were dissolved in MilliQ water and filter-sterilized. Overnight cultures used in all experiments were grown statically in 6-well plates with 3-5 mL of BHISG-YE media.
Columbia blood agar plates were used to plate in vivo samples. This medium consists of 35 g/L of Columbia Broth Powder (BD Difco™) dissolved in water and autoclaved 30 min at 121 °C. Once cool, and before pouring plates, defibrinated sheep blood (Hemostat Laboratories) was added to the media at a final volume of 5% (v/v), and supplemented with hemin (5 μg/mL) (MilliporeSigma) and vitamin K1 (1 μg/mL) (Alfa Aesar).
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2

Antimicrobial Efficacy of Commercial BCSOs

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Five commercially available BCSO products (A, B, C, D, and E) were purchased online. C. perfringens strains Cp#6 and Cp#4 were tested for susceptibility to the commercial BCSOs using the disk diffusion method (CLSI, 2007 ). C. perfringens colonies were suspended in 0.85% saline and the OD at 600 nm was adjusted to ca. 0.5. The suspension was swabbed using a sterile cotton swab onto brucella blood agar (BD BBL, Franklin Lakes, NJ) plates supplemented with 5 μg/mL vitamin K1 (Alfa Aesar, Haverhill, MA) and 1 μg/mL hemin (MP Biomedicals, Santa Ana, CA). BCSO dilutions of 1:10, 1:20, and 1:30 were prepared using dimethyl sulfoxide (DMSO) (MP Biomedicals, Santa Ana, CA). Twenty µLof BCSO dilutions, thymoquinone (TQ) (LKT Laboratories Inc., St. Paul, MN) as the positive control, and DMSO as the negative control were each deposited onto a sterile 6 mm blank disk (BD BBL, Franklin Lakes, NJ), then dried under a biosafety hood at room temperature for 60 min. The disks were then placed on the inoculated brucella blood agar plates. All the plates were incubated at 37°C for 24 h in BACTRON EZ anaerobic chamber and the diameters of the inhibition zones were recorded.
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Antimicrobial Screening of H. perforatum Oil

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H. perforatum oil was produced by the Keroya Company. Brucella agar, vitamin K1, calcitonin antibiotic, defibrinated sheep blood, Thioglycolate broth, horse serum, trypsin reagent, amoxicillin, ciprofloxacin, metronidazole, amikacin, and gentamicin were purchased from Gibco, Ireland.
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4

Antimicrobial Compound Extraction Protocol

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Curcumin powder was obtained from Sigma-Aldrich (Oakville, ON, Canada), and ethanol and hexane were purchased from Merck Company (Darmstadt, Germany). Thioglycolate broth, Brucella agar, defibrinated sheep blood, horse serum, vitamin K1, calcitonin antibiotic, trypsin reagent, amoxicillin, metronidazole, ciprofloxacin, amikacin, and gentamicin were purchased from Gibco, Ireland.
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