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35 protocols using dy201

1

Quantification of Inflammatory Cytokines

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The concentrations of IL1B, IL6, CXCL8, and VEGF (R&D Systems, DY201, DY206, DY208, and DY293B) were determined using ELISA kits for humans according to the manufacturer’s instructions. A multifunctional microplate reader (Molecular Devices, Sunnyvale, CA, USA) was used to measure the absorbance of each protein at a wavelength of 450 nm.
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2

ELISA Assay for IL-1β and IL-18

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The presence of cytokines in supernatants was assessed by means of ELISA for IL-1β and IL-18 using DY201 and DY008 kits, respectively (R&D Systems), according to the manufacturer's guidelines.
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3

ELISA Analysis of IL-1β and VEGF Levels

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IL-1ß and VEGF levels were assessed by ELISA analysis, performed in fresh supernatant derived from serum-free media of cells cultured with or without treatments. Briefly, cell supernatant was collected through centrifugation (500 Å∼ g, 5 min, 4°C). The levels of IL-1β and VEGF in the supernatant (100 μL) of ARPE-19 cells were detected using sandwich ELISA kits according to the manufacturer’s protocol of each kit (DY201, R&D Systems, Minneapolis, United States, and ENZ-KIT156-0001, Enzo Life Science, Milano, Italy, respectively).
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4

Quantifying Cytokine Release in Immune Cells

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N9 cells were seeded at the concentration of 9 × 104 cells/well into a 12-well plate and then the day after were treated as described above. Levels of TNF-α released into the culture medium were quantified after 3, 6, and 24 h by using the corresponding quantification enzyme-linked immunosorbent assay (ELISA) kits (88-7324, Thermo Fisher Scientific, Monza, Italy) according to the manufacturer’s instructions. Levels of IL-6 and IL-1β released into the culture medium were quantified after 24 h by using the corresponding quantification enzyme-linked immunosorbent assay (ELISA) kits (DY406, DY401, R&D systems, Minneapolis, MN, USA). PMA-THP-1 cells were seeded at a concentration of 8 × 104 cells/per well into a 96-well plate and differentiated as described above. Cells were then treated with 100 nM PEA or RePEA as indicated above. Levels of TNF-α, IL-6, and IL-1β released into the culture medium were quantified after 24 h by using the corresponding quantification enzyme-linked immunosorbent assay (ELISA) kits (DY210, DY206, DY201, R&D systems, Minneapolis, MN, USA) according to the manufacturer’s instructions. The data were expressed as pg/mL following interpolation on the basis of a standard curve. The experiment was done in triplicate and repeated for three independent measurements.
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5

Quantifying IL-1β and Cell Viability

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IL-1β was quantified by ELISA (limit of detection, 7.8 pg/mL; DY-201; DuoSet ELISA; R&D Systems) in cell culture supernatants following manufacturer’s instructions. Cell viability was assessed on cells washed once with DPBS by the water-soluble tetrazolium salt (WST-1) assay (Roche), following manufacturer’s instructions.
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6

Whole-blood cytokine production assay

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Within 30 min of blood sampling, 50 μL of whole-blood was LPS stimulated in triplicates after having been diluted 1:10 in RPMI medium (LONZA, BE12-167F) supplemented with LPS (Sigma-Aldrich, L2645-1MG) in a final concentration of 1 μg mL−1. Samples were incubated for ~24 h at 37 °C and 5% CO2 in order to determine ex vivo cytokine production. After incubation supernatants were harvested and stored at −80 °C until ELISA measurements of IL-1β, IL-6, TNF-α and IFN-γ (R&D Systems, DY201, DY206, and DY210, respectively)73 (link). The CV% was 3.6–5.2%.
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7

Measurement of IL-1β, LDH, and Caspase-1 Activity

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The IL-1β levels in the cellular supernatants and peritoneal lavages were measured using an enzyme-linked immunosorbent assay (ELISA) kit (DY201 or DY401, R&D SYSTEMS). LDH secretion was analyzed using an assay kit (BCT-LDHP, BIOMAX, Seoul, Republic of Korea). For the ROS measurement, LPS-primed BMDMs (1.25 × 105 cells/well in a 96-well-black plate) were treated with dihydrorhodamine 123 (DHR123, CAYMAN CHEMICAL, Ann Arbor, MI, USA) in the presence of rotenone (160 μM) and JC for 6 h. The caspase-1 activity was determined using mouse recombinant caspase-1 (one unit per reaction, BIOVISION, Milpitas, CA, USA) and a caspase-1 fluorometric assay kit (BIOVISION) in the presence of JC or the pan-caspase inhibitor (Z-VAD-FMK, 10 μg/mL; R&D SYSTEMS). The recombinant caspase-1 was co-incubated JC or Z-VAD-FMK in the reaction buffer containing YVAD-AFC for 1 h at 37 °C according to the manufacturer's protocol. The plates were analyzed using a multi-microplate spectrophotometer (Synergy H1 Hybrid Multi-Mode Reader, BIOTEK, Winooski, VT, USA).
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8

Quantifying Cytokine Release in Co-culture

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The release of IL-1β, IL-8, TNF-α, and TGF-β1 was quantified using cell-free supernatants from the BL compartment after 4, 24, or 48 h of co-culture. The ELISA was run as described by Kinsner et al. (2006) (link) using commercially available antibody pairs (R&D Systems, Cat.: DY210, DY201, DY208, DY240; Abingdon, Oxfordshire, UK). Briefly, the primary antibodies were incubated overnight at room temperature (RT) in coating buffer (0.1 M NaHCO3 in MilliQ H2O) on high protein-binding 96-well plates (Thermo Fisher Scientific). After washing (PBS + 0.05% Tween20) and blocking (3% BSA/PBS) for 1 h at RT, the cytokine standards and supernatant samples were added and incubated for 2 h at RT, followed by incubation for 45 min with biotinylated secondary antibodies. After 30 min incubation with streptavidin-peroxidase (Biotrend Chemikalien; Cologne, NRW, Germany), 100 μL 3,3′,5,5′-Tetramethylbenzidine (Sigma-Aldrich) was added and the reaction was stopped with sulfuric acid (1 M) after 5 (IL-8) or 15 min (TNF-α, TGF-β1, and IL-1β). The absorbance was read spectrophotometrically (Enspire, Perkin Elmer; Milano, Lombardy, Italy) at 450 nm.
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9

PBMC Cytokine Induction Assay

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Buffy coats obtained from healthy blood donors were mixed 1:1 with 2% dextran. After sedimentation of erythrocytes, peripheral blood mononuclear cells (PBMCs) were separated by Ficoll-Paque (Lymphoprep, Nycomed, Oslo, Norway) density centrifugation. PBMCs were cultured overnight in Iscoves’ medium supplemented with 10% human AB serum, in the presence or absence of 0.5 µg/ml LPS (Sigma-Aldrich), 100 µM HDC (Sigma-Aldrich), 100 nM diphenylene iodonium (DPI; Sigma-Aldrich) or 500 U/ml IL-2 (Proleukin, Chiron). After 24 h, supernatants were collected and assayed for IL-1β and IL-1RA using ELISA (R&D systems, DY201, and R&D systems, DY280-05, respectively) according to the manufacturer’s instructions.
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10

Lentiviral Transduction of THP-1 MEFV KO Cells

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Lentivirus was produced as previously described [28 (link)]. One million THP-1 cells MEFV KO were infected using 3 ml of virus and 7 μg of polybrene. Plates were centrifuged at 800 g for 3 h at 32°C and then incubated at 37°C. Cells were washed in Dulbecco’s PBS (DPBS, Gibco) 24 h after infection and seeded 48 h after infection with or without Pam3CSK4 (500 ng/ml, InvivoGen, San Diego, CA, USA, 112208–00-1) and native Clostridioides difficile Toxin B protein at various concentrations (TcdB, ab124001, Cambridge, UK). Cells were lysed and immunoblotted for protein expression. IL-1β and IL-18 were measured in culture supernatants by ELISA 24 h after seeding (R&D Systems, DY201 and DY318-05).
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