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Genegnome bio imaging system

Manufactured by Syngene
Sourced in United Kingdom, United States

The GeneGnome Bio Imaging System is a versatile lab equipment designed for high-resolution imaging and analysis of biological samples. It features a high-sensitivity CCD camera and advanced optics for capturing detailed images of gels, blots, and other specimen.

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7 protocols using genegnome bio imaging system

1

Western Blot Analysis of Cell Signaling

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Following total protein extraction, western blotting was performed as previously described [30 (link)]. Primary antibodies used in this study were as follows: rabbit anti-Akt (Cat. # 9272), pAkt (S473, Cat. # 9271), LKB1 (Cat. # D60C5) and PARP (Cat. # 9542) antibodies were from Cell Signaling Technology (Danvers, MA), mouse anti-FAK (clone 77/FAK) was from BD Transduction Laboratories (Mississauga, ON), and mouse anti-β-actin antibody (clone AC-74) was from Sigma (St. Louis, MO). Following incubation with primary antibody overnight, membranes were washed 3 x 5 minutes and incubated in horse radish peroxidase (HRP) conjugated goat anti-mouse or goat anti-rabbit secondary antibody (Calbiochem, San Diego, CA) for 1 hour. Membranes were then washed 6 x 5 minutes and incubated in Immobilon Western Chemiluminescent HRP Substrate (EMD Millipore, Billerica, MA) prior to image development using the GeneGnome Bio Imaging System and GeneSnap software (Syngene, Frederick, MD).
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2

Protein Extraction and Immunoblotting from Frozen Tumor Samples

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Frozen tumor samples were homogenized and cell membranes were prepared by hypotonic lysis and high-speed centrifugation, as previously described [55 (link)]. Tumor membrane preparations, or cultured cells, were lysed with Laemmli buffer and proteins were separated by gel electrophoresis before their transfer onto Immobilion P membranes (Millipore, Bedford, MA, USA) for immunoblotting. Immune complexes were detected by enhanced chemiluminescence (GE Healthcare Amersham-Fisher Scientific, Waltham, MA, USA) and quantified using the GeneGnome Bio Imaging System (Syngene, Frederick, MD, USA). Immunoprecipitation was performed as described previously [56 (link)].
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3

Quantification of Cleaved Caspase-3 in Cells

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Protein was extracted from intestinal mucosal samples and IEC-6 cells. The levels of cleaved caspase-3 expression were determined using a specific antibody against the large fragment (17 kDa) of activated caspase-3 that resulted from cleavage. Twenty micrograms of total protein was electrophoresed on a 12% (w/v) SDS-PAGE gel, transferred onto a nitrocellulose membrane and blocked with 5% (w/v) nonfat dried milk. The membranes were probed with the caspase-3 primary antibody (Cell Signaling Technology, Danvers, MA, USA, 9665, 1 : 200) followed by the peroxidase-conjugated secondary antibody. The protein signal was visualized with chemiluminescence reagents under a GeneGnome Bio Imaging System (Syngene, MD, USA). The amount of cleaved caspase-3 was quantified by densitometry and normalized to the internal control (GAPDH).
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4

Western Blot Analysis of Protein Expression

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Cells were lysed in RIPA buffer plus protease inhibitors (Millipore, USA). The lysates were then subjected to SDS-PAGE, electrotransferred to PVDF membranes (Millipore, USA), blocked with 5% nonfat milk, incubated with antibodies for 2 hours at room temperature, including anti-beta-tubulin (Abmart, M20005, 1:2000, China), anti-BANF1 (Santa Cruz, sc-33787, 1:200, USA), HRP anti-rabbit (KPL, 4751-1516, 1:2000, USA) and HRP anti-mouse (KPL, 0751-1809, 1:2000, USA), and visualized using cECL Detection Reagents (CWBIO, China). Images were acquired using the Gene Gnome Bio Imaging system (Syngene, UK).
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5

Western Blotting Protein Analysis

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Western blotting procedures were previously described [12 (link), 13 (link)]. Briefly, protein samples were separated by SDS-PAGE on a 10% gel, soaked in transfer buffer, and transferred to a PVDF membrane. The membrane was incubated with primary Abs overnight then with HRP-conjugated secondary Abs for 60 min at room temperature. Protein bands were visualized with an ECL Prime kit (GE Healthcare UK, Ltd.), and immunoblotting signals were acquired with a GENEGNOME Bio Imaging System (SYNGENE).
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6

Western Blot Analysis of TLR4 in Heart Tissue

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Western blot was used to determine the protein levels of TLR4, as described previously 15. Heart tissue was homogenized and isolated cardiomyocytes were lysed in RIPA buffer supplemented with protease inhibitors (Beyotime Institute of Biotechnology, Jiangsu, China), sonicated on ice and protein concentration was determined using a bicinchoninic acid kit (Beyotime Institute of Biotechnology). The lysates (20 μg of total proteins) were electrophoresed on a 10% SDS‐PAGE gel and transferred onto a nitrocellulose membrane. The membrane was then blocked with 5% non‐fat dried milk, and probed with the primary antibody against TLR4 (Cat. NB100‐56566; Novus Biologicals, Littleton, CO, USA) followed by the peroxidase‐conjugated secondary antibody, at the concentration of 1:500 and 1:1000 respectively. The signal was visualized using chemiluminescence reagents, scanned with a GeneGnome Syngene Bio Imaging system and quantified by densitometry.
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7

Western Blot Analysis of Epithelial-Mesenchymal Transition Markers

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Total proteins were extracted from fresh tissues and cells using RIPA Protein Lysis solution (Pierce, IL, USA) and quantified by the Bradford method. Prepared samples were electrophoresed by sodium dodecyl sulfate polyacrylamide gel electrophoresis and blotted onto a polyvinylidene fluoride membrane (Millipore, MA, USA) using the Tetra Handcast system (Bio-Rad, USA). The membrane was blocked for 1 h at room temperature or overnight at 4 °C in Tris-buffered saline with 0.05% Tween (TBST) containing 5% non-fat milk. Then it was incubated overnight at 4 °C with the appropriate primary antibody, and followed by the secondary antibody for 70 min at room temperature. The protein bands were detected and quantified using the Gene Gnome Syngene Bio Imaging System (Syngene, UK) with an electrochemiluminescence kit (Pierce, IL, USA).
The primary anti-SOX3 antibody was purchased from Abcam (MA, USA), and the anti-β actin antibody was purchased from Santa Cruz Biotechnology Inc. (CA, USA). Other primary antibodies (anti-E-cadherin, anti-CK-18, anti-N-cadherin, anti-vimentin, anti-Snail1, anti-Twist1, anti-Slug, anti-ZEB1, anti- ZEB2, anti-FLAG) were purchased from Cell Signaling Technology (MA, USA). Anti-mouse or anti-rabbit HRP-conjugated secondary antibodies were purchase from Santa Cruz Biotechnology Inc. (CA, USA).
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