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3 protocols using anti rad51

1

Immunoblotting and Immunohistochemical Analysis

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Immunoblotting was performed using anti-phospho-RB (Cell Signaling, Danvers, MA, USA), anti-RB (GeneTex, Irvine, CA, USA), anti-phospho-Akt(Ser473) (Cell Signaling), anti-Akt (Cell Signaling), anti-phospho-Erk1/2(Thr202/Tyr204) (Cell Signaling), anti-Erk1/2 (Cell Signaling), anti-TOP2A (Cell Signaling), anti-CCND1 (Cell Signaling), anti-γH2AX (Cell Signaling), anti-CDK2 (GeneTex), anti-RAD51 (GeneTex), anti-CDK4 (Cell Signaling), and anti-GAPDH (GeneTex) antibodies followed by horseradish peroxidase-conjugated secondary antibodies and visualization using an enhanced chemiluminescence detection system. Immunohistochemical (IHC) sample preparation and staining with anti-GFAP (Genetex), anti-phospho-RB (Cell Signaling), anti-Ki-67 (Cell Signaling), and anti-γH2AX (Cell Signaling) antibodies were carried out as previously described [48 (link)]. Uncropped Western blot images are provided in Figure S5.
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2

Protein Expression Analysis Protocol

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Exponentiall growing cells were collected by trypsinization, washed with PBS, and lysed in RIPA buffer (50 mM Tris–HCl, pH 7.2, 150 mM NaCl, 1% Nonidet P-40, 1% Sodium deoxycholate and 0.1% Sodium dodecylsulfate) containing protease inhibitor cocktail (Roche Japan, Tokyo, Japan). Protein concentrations were determined by BCA protein assay (Thermo Fisher Scientific), and 8 µg of proteins were electrophoresed on 5–10% SDS–polyacrylamide gels, and then electrophoretically transferred to a polyvinyl difluoride membrane. Primary antibodies used in this study are as follows: anti-RAD51 (GTX70230, GeneTex), anti-MRE11 (clone 12D7, GeneTex), anti-ATM (clone 1A1, GeneTex), anti-Rad50 (clone 13B3, GeneTex), anti-NBS1 (clone 1D7, GeneTex), anti-BRCA1 (clone 6B4, GeneTex), anti-BRCA2 (clone 1B8, GeneTex), anti-Ku86 (clone 111, Kamiya Biochemical co., Seattle, WA, USA), anti-Ku70 (clone N3H10, Kamiya Biochemical co.), anti-DNA-PKcs (MC-365, Kamiya Biochemical co.), anti-XRCC4 (GTX70293, GeneTex), anti-Lig IV (GTX74360, GeneTex), anti-XLF (A300-730, BETHYL Laboratories, Inc.), and anti-γ-tubulin (clone DTU-88, Sigma-Aldrich).
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3

Antibody Characterization for DNA Damage Response

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Primary antibodies used in this study were as follows (Table S1): Anti-RecQL4 antibody was prepared by Abfrontier by immunizing rabbits with recombinant N-terminal (amino acid residues 1–241) RecQL4. Other antibodies used in this study were as follows: Anti-pATM (Ser-1981, #4526, Cell Signaling), anti-Mre11 (GTX30294, GeneTex), anti-Nbs1 (A7703, ABclonal), anti-Rad50 (sc-74460, Santa Cruz), anti-Rad51 (GTX100469, GeneTex), anti-RPA32 (MABE-286, EMD Millipore), anti-Usp28 (A9292, ABclonal), anti-Skp2 (sc-7164, Santa Cruz), anti-γH2AX (A300-081A, Bethyl and 05-636, EMD Millipore), anti-lamin B1 (ab16048, Abcam), anti-GAPDH (sc25778, Santa Cruz), anti-FLAG M2 (Sigma), and anti-HA (AE008, ABclonal). The following antibodies were used as secondary antibodies in immunofluorescence microscopy: Alexa Fluor 488 anti-mouse IgG (A11001, Thermo Fisher), Alexa Fluor 488 anti-rabbit IgG (A11008, Thermo Fisher), Alexa Fluor 594 anti-mouse IgG (A11005, Thermo Fisher), and Alexa Fluor 594 anti-rabbit IgG (A11012, Thermo Fisher).
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