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4 protocols using adam9

1

Western Blot Analysis of Cellular Proteins

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Lysates from cells and tissues were prepared using RIPA buffer containing a protease inhibitor cocktail (Sigma‐Aldrich, Merck, kGaA, Darmstadt, Germany). Proteins were separated using SDS/PAGE gels and were electrotransferred to nitrocellulose filter membranes (Millipore, Bedford, MA, USA). The membranes were blocked in 5% non‐fat milk and immunoblotted with primary specific antibodies overnight at 4 °C, followed by their respective secondary antibodies. The primary antibodies were used as follows: ADAM9 (#ab186833; Abcam, Cambridge, MA, USA), USP39 (#ab131244; Abcam), integrin β1 (#34971; CST, Danvers, MA, USA), GAPDH (#60004‐1‐Ig; Proteintech, Wuhan, China), β‐Actin (#AA128; Hua An Biotechnology, Hangzhou, China).
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2

Biomarker Screening via ELISA and Western Blot

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Potential biomarker proteins were screened using either ELISA or Western blot techniques. Commercially available ELISAs were used for transferrin and albumin (Assaypro LLC, St. Charles, MO), sTfR and α-amylase (BioAssay Systems, Hayward, CA), fibrinogen (Innovative™ Research Inc., Novi, MI) and a custom direct ELISA method for γ-H2AX (12 (link)). Antibodies for Western blots were obtained from: CUGBP1 (Upstate®, Billerica, MA), CUGBP2 (Zymed Laboratories Inc., San Francisco, CA), ADAM9 (Abcam®, Cambridge, MA), ENO1 (Abcam), MUC1 (Santa Cruz Biotechnology® Inc., Dallas, TX), FMRP (Chemicon International Inc., Billerica, MA) and ST3GAL1 (Novus Biologicals LLC, Littleton, CO).
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3

Immunohistochemistry for MERTK, pMERTK, and ADAM9

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Immunohistochemistry was performed as described previously47 (link). In brief, paraffin-embedded tissue sections (5 μm) were deparaffinized, hydrated and washed in TBS (10 mM/l Tris HCl, 0.85% NaCl, and pH 7.5) containing 0.1% bovine serum albumin. Endogenous peroxidase activity was quenched by incubating the slides in methanol and 0.6% H2O2 in methanol. In all cases, the primary antibody, namely MERTK (1:100), phospho-MERTK (1:50) and ADAM9 (1:50) (Abcam, Cambridge, MA), was incubated overnight at 4 °C. The slides were washed in TBS, and HRP-conjugated secondary antibody (Santa Cruz Bio-technology, Dallas, Texas) was added and the sections were further incubated at room temperature for 45 min. The sections were washed in TBS and incubated with diaminobenzidine tetrahydrochloride as the substrate, and counterstained with hematoxylin and observed under light microscope.
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4

Protein Expression Analysis by Western Blot

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Cells were lysed in RIPA buffer (Sefton 2001 ), and total cell proteins were separated in a 6%–15% denaturing polyacrylamide gel, transferred to nitrocellulose (Amersham Biosciences), and probed using antibodies recognizing TSN (Abcam), UPF1 (Serin et al. 2001 (link)), Flag (Sigma), MYC (Calbiochem), AGO2 (Abcam), GW182 (Bethyl Laboratories), PABPC1 (Santa Cruz Biotechnology), calnexin (Enzo Life Sciences), HIS (Qiagen), GAPDH (Santa Cruz Biotechnolgy), ITGA5 (Abcam), ITGA2 (Abcam), ANGPTL4 (Thermo Fisher Scientific), ADAM9 (Abcam), or Dicer (Abcam). Blots were quantified using Image Quant (Molecular Dynamics).
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