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16 protocols using ab183612

1

Western Blot Analysis of Alzheimer's Biomarkers

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Rat cerebral tissues or cell lysates of the above groups were placed in ice-precooled RIPA lysis buffer (Beyotime) for 30 min, followed by centrifugation (12000 g, 10 min, 4° C). The supernatant was used for analysis. Protein concentration was determined using the BCA (Beyotime) method. Proteins were subjected to 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (Beyotime) for separation, transferred to the nitrocellulose membranes (Whatman Inc., Piscataway, NJ, USA), and then blocked for 1 h with blocking solution (P0023B, Beyotime) at room temperature. Afterwards, the membranes underwent an overnight incubation with primary antibodies at 4° C, followed by membrane washing and then a 2-h incubation at room temperature with secondary antibody horseradish peroxidase-labeled immunoglobulin G (IgG) H&L (ab205718, 1:5000, ABCAm). The enhanced chemiluminescence working solution (EMD Millipore Corporation, Billerica, MA, USA) was used for development. ImageJ 1.48 (National Institutes of Health) was used for data analysis with β-actin as an internal reference. The primary antibodies (all from ABCAm) were neprilysin (NEP) (ab216341, 1:1000), insulin-degrading enzyme (IDE) (ab133561, 1:1000), BACE1 (ab183612, 1:1000), Wnt3a (ab219412, 1:1000), β-catenin (ab32572, 1:5000) and β-actin (ab8227, 1:1000).
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2

SDS-PAGE Analysis of APP, BACE1, and PKA

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The extracted proteins were separated by electrophoresis with 10% SDS-PAGE. Gel was run at 80 V for 20 min and 120 V for 60 min and then transferred onto PVDF membranes at 4°C at 80 V for 1.5 h. The target proteins APP, BACE1, and PKA were measured by incubating with the primary antibodies against APP (1 : 2000, MAB348, Millipore, USA), BACE1 (1 : 2000, ab183612, Abcam, USA), p-PKA (1 : 2000, ab32390, Abcam, USA), and PKA (1 : 2000, ab75993, Abcam, USA) at 4°C overnight. After washing three times with TBST, the corresponding secondary antibody was used at a dilution of 1 : 2000 (bs-40295G, bs40296G, Bioss, China), followed by visualization with the ECL kit (mixed with 1 : 1, PE0010, Solarbio, China). The exposure was completed in a dark room with the chemiluminescence gel imaging system (C600, Azure Biosystems, USA). The antibodies against GAPDH (1 : 2000, TA-08, Zsbio, China) and β-actin (1 : 2000, bs-0061R, Bioss, China) were used as internal controls. Quantitative results were expressed as a ratio of APP to GAPDH, BACE1 to β-actin, and p-PKA to PKA and then compared in each group to measure relative changes.
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3

Western Blot Quantification of MOAB-2, BACE1 in Cells

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Cultured cells or brain tissues were homogenized in ice‐cold RIPA Lysis and Extraction Buffer (89901; Thermo, CA, USA) supplemented with a protease inhibitor cocktail (78439; Thermo, CA, USA). The protein concentration was determined using a BCA assay kit (23250; Thermos, CA, USA). Protein samples were separated by 8%–12% SDS–PAGE, blotted onto a polyvinylidene fluoride membrane (Millipore), blocked for 60 minutes in 5% milk and incubated overnight at 4℃ with rabbit monoclonal anti‐MOAB‐2 (1:2,000; ab126649; Abcam), mouse monoclonal anti‐β‐actin (1:4,000; A5441; Sigma), rabbit monoclonal anti‐BACE1 (1:1,000; ab183612; Abcam) and mouse monoclonal anti‐GAPDH (1:4,000; AF0006; Beyotime) antibodies. After three washes with TBST, the membranes were incubated with horseradish peroxidase‐conjugated goat anti‐mouse or goat anti‐rabbit secondary antibodies at room temperature for 2 hours. The immunoreactive bands were detected using an enhanced chemiluminescence reagent (ECL, Pierce) and quantified using ImageJ software.
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4

Western Blot Analysis of BACE1 and Tau Pathology

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Neuro-2a cells were harvested at day 3 after incubation with Gal-NP@Cy5-siRNA and control vectors. For sufficient siBACE1 verification, mouse brain tissues were taken from Balb/c mice after two siRNA injections. In therapeutic evaluation, mouse brain tissues were taken 1 day after completion of behavioral assessments. Animals were anesthetized and transcardially perfused with saline. Tissue (whole hippocampus and cortex) and cells were homogenized in radioimmunoprecipitation assay lysis buffer with a proteinase and phosphorylase inhibitor cocktail (Thermo Fisher Scientific) and centrifuged for 15 min (12,000 rpm, 4°C). The protein concentration of the supernatant was determined using the BCA Protein Assay Kit (Beyotime, China). Standard Western blot electrophoresis was then performed, with proteins transferred onto polyvinylidene difluoride membranes (Millipore 0.22 μm) and immunoblotted. Primary antibody BACE1 (Abcam, AB183612), p-tau (Abcam, AB151559), MBP (Abcam, AB40390), β-actin (Abcam, AB8226), or GAPDH (Abcam, AB181602) and mouse or rabbit secondary antibody (LI-COR IRDye 800CW) were used. Data quantification was performed by ImageJ software.
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5

Imaging Hippocampal Amyloid Pathology

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The hippocampal sections were isolated and perfused with PBS and 0.2% Triton X-100 and then fixed in 4% paraformaldehyde for 24 h. The left brain sections were rapidly frozen under -50°C, followed by transversely cutting the tissue samples into 5 μm slices. The slices were then incubated at 4°C with anti-APP (1 : 200, MAB348, Millipore, USA) and BACE1 (1 : 300, ab183612, Abcam, USA) antibodies. After permeabilization and blocking overnight, appropriate secondary antibodies (ab150113, ab150115, Abcam, USA) were used at a dilution of 1 : 200. After washing three times with PBS, the sections were incubated with DAPI (C0065, Solarbio, China) for 10 min, followed by live imaging. The hippocampal images were captured and obtained with a confocal laser microscope (FV1000, Olympus, Japan) at 1000x magnification.
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6

Western Blot Analysis of Microglial Proteins

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Radioimmunoprecipitation Assay Lysis Buffer (Beyotime, Nanjing, China) was used to extract proteins from microglial cells. Bicinchoninic Acid Protein Assay Kit (Thermo Fisher Scientific, Waltham, MA, USA) was applied to determine the concentration of isolated proteins. Protein samples were loaded at 12% sodium dodecyl sulfate polyacrylamide gel electrophoresis and then transferred onto polyvinylidene fluoride membranes (Millipore, USA). Subsequently, the membranes were incubated with primary antibodies at 4°C overnight, which included anti-Map3k12 (JK221305, Shanghai JingKang Bioengineering CO., LTD., Shanghai, China), anti-BACE1 (ab183612, 1:1000, Abcam), anti-Tau-5 (ab80579, 1:1000, Abcam), anti-p-ERK1/2 (ab278538, 1:100, Abcam), anti-ERK1/2 (ab17942, 1:1000, Abcam), anti-p-p38 (ab195049, 1:1000, Abcam), anti-p38 (ab31828, 1:1000, Abcam), and GAPDH (ab8245, 1:1000, Abcam). Then, the membranes were incubated with secondary antibodies at room temperature for 2 h. The protein bands were imaged by enhanced chemiluminescence reagent (Bio-Rad) and analyzed by ImageJ software (National Institutes of Health, Bethesda, MA, USA) [40 (link)].
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7

Western Blot Analysis of Proteases

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The standard BCA assay procedure was done as previously described (Huang et al., 2010 (link)). After blocking, the membranes were probed with the following primary antibodies (Cell Signaling, Beverly, MA, USA) using different dilutions: rabbit anti-MMP2 (92 kDa, Abcam ab92539, 1:2000), rabbit anti-MMP9 (92 kDa, Abcam ab38898, 1:2000), rabbit anti-BACE1 (68 kDa, Abcam ab183612, 1:1000), rabbit anti-APP (87 kDa, Abcam ab15272, 1:600), and mouse anti-beta-actin (42 kDa, Boster, BM0627, 1:200). All experiments were performed at least three times.
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8

Molecular Markers for Alzheimer's Research

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We purchased the following materials from the sources indicated: PNU-282987 (Sigma-Aldrich, USA), anti-synaptosome-associated protein 25 (SNAP-25), anti-NRF2, and anti-HO-1 antibodies (GTX113839, GTX103322, GTX 101147, Gentex, Inc., USA), anti-synaptophysin (SYP), anti-β-site amyloid precursor protein-cleaving protein 1 (BACE1) anti-BACE 2 antibodies (ab8049, ab183612 and ab270458, Abcam, Inc., USA); anti-Aβ (6E10, SIG-39340, BioLegend, Inc., USA), and anti-β-actin, anti-α disintegrin, and metalloproteinase 10 (ADAM10) antibodies (sc-376421and sc-28358, Santa Cruz, Inc., USA).
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9

Neuroinflammation and Alzheimer's Pathology

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Mice were euthanized and perfused with 4% paraformaldehyde (PFA), and whole brains were carefully removed and fixed by immersion in PFA, followed by dehydration with 30% sucrose. The brains were OCT-embedded to obtain 8-μm-thick frozen sections. For the staining procedure, brain slices were incubated in a blocking solution (10% donkey serum, 0.3% Triton 100 in PBS solution) at room temperature for 1 h. After PBS washes, the sections were incubated with primary antibodies overnight at 4°C. The following primary antibodies were used: Iba-1 (ab283346; Abcam) and BACE1 (ab183612; Abcam). After PBS washes, sections were incubated with fluorescent secondary antibody antibodies: donkey anti-rat Alexa Fluor 488 (A48269TR; Invitrogen) and donkey anti-rabbit Alexa Fluor 594 (A32754; Invitrogen). Finally, the brain slices were washed 3 times with PBS and then incubated with DAPI Fluoroshield mounting medium in the dark, followed by photography using confocal microscopy. All the images were taken at the peri-hematoma area.
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10

Quantitative Western Blotting of BACE1, STAT3, and p-STAT3

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The standard protocol was performed as previously described [21 (link)]. Briefly, cells were lysed on ice for 20 min with RIPA buffer containing protease inhibitor and phosphatase inhibitor. After buffer was loaded, all samples were subjected to SDS-PAGE and blotted onto PVDF membranes. After blocking with 5% fetal bovine serum (BSA) in TBST, membranes were incubated with primary antibodies overnight at 4°C. The primary antibodies were rabbit-anti-BACE1 antibody (ab183612, Abcam), rabbit-anti-STAT3 antibody (A19566, Abclonal), and rabbit-anti-phospho-STAT3-S727 antibody (ab267373, Abcam). After three washes with TBST, the membranes were incubated with HRP-conjugated anti-rabbit secondary antibodies in 5% BSA for 2 hours at room temperature. The signals on the membranes were developed with ECL HRP substrate, and images were acquired with a molecular imager (ChemiDoc MP, Bio-Rad) and analyzed with ImageJ.
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