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91 protocols using smz800n

1

Quantifying Plant Growth Responses to Azospirillum

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After cocultivation with A. brasilense for an indicated time, the root and shoot fresh weight, the number of root hairs and lateral roots, and the length of root hairs were measured and analyzed. For the fresh biomass detection, root and shoot were cut by a scalpel, and the weight of three separate samples was immediately measured on an analytical balance. After two and three days of co-cultivation, the stereomicroscope (Nikon SMZ800N) was used to photograph the root hairs and then using ImageJ to quantify the number and length of the root hairs. The number of emerged LR (greater than 0.5 mm) of at least 20 seedlings was counted using the stereomicroscope (Nikon SMZ800N). Cell length measurements were performed on single cortical cells located in the elongation zone and differentiation zone. Digital confocal images of propidium iodide-stained roots were analyzed with ImageJ software.
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2

Liver Tissue Processing for Histological Analysis

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The livers from four fish in each group were treated with Advanced Smart Processor Vacuum Tissue Processor ASP300 S (Leica, Germany) before paraffin embedding. The clearing reagent was turpentine oil. The tissue was then embedded in paraffin and sliced to a thickness of 5 μm using the microtome RM2235 (Leica, Germany). After rehydration, the sections were stained with hematoxylin and eosin (81 (link)). And then the sections were mounted and visualized with versatile stereo microscope SMZ 800N (Nikon, Japan).
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3

Light Microscopy Characterization of Printed Formulations

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Light microscopy characterization of printed formulations was performed with a stereomicroscope SMZ800N (Nikon, Tokyo, Japan) equipped with home-made bottom illumination and camera (13MPx, Samsung, Seoul, Korea) for imaging.
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4

Organoid Viral Transduction Protocol

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Use a 1 ml pipette tip or a notch pipette to transfer organoids into a medium dish, add 50 μl of NIM medium to each organoid to prevent drying. Place virus on ice immediately after removing from −80°C freezer. Place the organoids under a microscope (Nikon SMZ800N). First, use a 4× microscope to find the location of the organoids, adjust the objective magnification according to the size of the organoids, and then use a micro syringe to start the injection. Each organoid was injected twice, 0.5 μl virus each time. After finishing the injection, add 50 μl of virus dilution solution (preparation of virus dilution solution: 500 μl NIM + 1:50 B27 + 1:2,000 Polybrene + 1:100 PS + 1:100 virus stock solution). After incubation for 24 h, the cells were transferred to T12.5 cell culture flasks, supplemented with 3 ml of NIM medium.
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5

Tick Identification and Characterization

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Ticks received by mail or in person were kept at 4°C and examined alive. Specimens were identified with a Nikon SMZ800N stereomicroscope using appropriate morphological characters and identification keys (Estrada‐Peña et al., 2018 ; Walker et al., 2003 ). The species, sex, developmental stage, engorgement state, host and place of origin of the ticks were recorded.
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6

Collecting and Identifying Bird Lice

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We collected 17 species of bird lice; 16 of these species were collected in the Australian Zoo Wildlife Hospital (AZWH) from euthanized birds and one species was from live birds (Australian white ibis, identified by D.P.) captured at the UniSC Fraser Coast campus (Table 1). Euthanized birds were initially identified by AZWH veterinary staff and verified by two of the authors (Y.D. and R.S.) based on morphology according to Pizzey et al. [24 ] and Menkhorst et al. [25 ]. We used the post-mortem-ruffling method to collect bird lice [26 (link)]. Ethyl acetate was used to treat euthanized birds if lice were still alive. Ethanol-acetate-soaked cotton balls were put in sealed bags containing euthanized birds, one bird per bag to avoid contamination. After 5 to 10 min, treated birds were placed on a clean A1-size white paper, with their feathers ruffled to get lice off bird feathers onto the white paper. Lice were kept in 2-mL collection tubes filled with 80% ethanol at −80 °C in a freezer until DNA extraction. Lice were checked under a microscope (Nikon SMZ 800N), imaged, and identified by morphological features and host records according to the world checklist of chewing lice [1 ].
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7

Sexing Sea Turtle Hatchlings via Histological Analysis

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Hatchlings dying in one month were sexed through histological analysis of gonads following Tokunaga [13 (link)]. Gonads were excised from dead hatchlings immediately once found and fixed in Bouin solution. After dehydrated with a serial change in alcohol, the specimens were embedded in paraffin and sliced to 5 μm-thick sections. The slices were stained with hematoxylin–eosin and observed under stereomicroscope (Nikon SMZ800N, Tokyo, Japan). Sexes of hatchings dying in one to two months were determined by observing the shape of gonads stained with hematoxylin–eosin under a stereomicroscope. Hatchings that died in two to four months were sexed in a similar way except staining. Living hatchlings were sexed by everting the hemipenes in males after four months [14 (link)] (Table S1).
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8

Fracture Surface Analysis of Dental Specimens

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The fractured surface of each specimen in both the 0 and 24 h repair stages was examined using a stereomicroscope (20X magnification, SMZ800N, Nikon, Tokyo, Japan) to determine whether the fracture site was located at the interface of the bonding surface (denoted as A for “adhesive failure”), in any side of the RBC (denoted as C for “cohesive failure”), or was partially adhesive and partially cohesive (denoted as M for “mixed failure”).
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9

Assessing Oocyte Quality with LB Staining

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The selected COCs were placed in groups of 30 for 10 min. in 500 µL 0.5% LB at RT. Stained COCs were washed three times in mPBS (PBS + 0.4% bovine saline albumin-BSA) and observed under a Nikon SMZ800N stereomicroscope. After washing, the COCs were divided into two qualitative subgroups based on LB staining. We focused on detection of damaged cytoplasmic membrane, which was characterized by green stained ooplasm. Unstained (LB-) COCs with 0% stained cumulus cells were classified as high-quality COCs and stained (LB+) COCs with green ooplasm were designated as COCs with poor quality. In the LB+ group percentage of stained cumulus cells was not considered as an important marker (Figure 1) (Dutta et al., 2016 (link)).
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10

Rabbit Whisker Hair Follicle Culture

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We used whisker HFs for the organ cultures. Whisker HFs of a 4-week-old Rex rabbit was isolated as has been previously described for mice [16 (link)]. Early or mid-anagen growth phase follicles were selected for culture, and the part of the hair shaft that extended over the epidermal surface was cut off. HFs were plated in 24-well plates with one follicle per well at 31°C saturated humidity air temperature with 5% CO2 and 95% box in the general culture and cultured in one of the following basal media: Williams E medium (GIBCO, U.S.A.), penicillin–streptomycin (Solarbio, China), insulin (GIBCO, U.S.A.), hydrocortisone (Sigma, Germany), and L-glutamine (GIBCO, U.S.A.); basal medium containing AdWnt10b (Hanbio Co. LTD, China) and AdGFP (Hanbio Co. LTD, China) at ultimate titers of 108; or basal medium containing XAV-939 (10 µmol/l)(Sigma, Germany) and AdWnt10b plus XAV-939. After 2 days, every culture was replaced with fresh media, and the length of the outgrowing hair shafts was determined by analyzing the digital images at 5 days of growth with stereo microscope (Nikon SMZ800N, Japan).
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