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7 protocols using 35s methionine

1

In vitro Translation of RNAs

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In vitro transcribed RNAs were translated in 10 μl of the supplemented untreated RRL 50% (v/v) (Promega Co., Madison, WI, USA) in the presence of KCl (75 mM), MgCl2 (0.5 mM), 20 μM of amino acids mix minus methionine and 0.6 μCi of [35S]-methionine (GE Healthcare Life Sciences) for 30 min at 30°C. Reactions were stopped with 2× SDS-loading buffer and the products were resolved by 15% SDS–PAGE. Gels were dried and subjected to autoradiography using Biomax films (Eastman Kodak Co.).
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2

Mitochondrial Protein Synthesis Analysis

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Mitochondrial gene products were labeled in whole cells at 30 and 37°C for 10 min with 35S-methionine (7 mCi/mmol; GE Healthcare, Little Chalfont, Buckinghamshire, United Kingdom) in the presence of 0.2 mg/ml cycloheximide to inhibit cytoplasmic protein synthesis (42 (link)). Equivalent amounts of pulsed total cellular proteins were precipitated with trichloroacetic acid (25% w/v), fractionated by SDS-PAGE (17.5% polyacrylamide gel), transferred to a nitrocellulose membrane and exposed to a Kodak X-OMAT X-ray film. Autoradiographic images were digitalized and densitometry performed with the Quantity One software (Bio-Rad).
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3

Platelet Protein Synthesis Profiling

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Platelets (1 × 109 total) were placed in 1 mL of methionine-free M199 medium for 2 h followed by the addition of 50 µCi (1 Ci = 37 GBq) of [35S]methionine (GE Healthcare, Wauwatosa, WI, USA)) for each sample. After the addition of labeled methionine, the platelets were left in solution without any activator for 30 min. Then they were activated with thrombin, PAF or oxidized phospholipids in the presence of fibrinogen or not, or left quiescent without any activator (= control). Platelets were gently rocked and six hours later, the platelets were washed with Tris-buffer, the suspensions were centrifugated and the supernatants were removed. The cell pellets were lysed in RIPA-buffer on ice and identical volumes of the platelet lysates were separated by SDS-gel electrophoresis on a 9% gel. The gels were dried for 2 h in an 80 °C vacuum oven and exposed overnight to Kodak MS film placed in a −80 °C refrigerator.
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4

Molecular Cloning of Apoptosis Proteins

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Full-length FADD, Caspase-8 and c-FLIPS were cloned into pcDNA3 vectors with or without a non-cleavable 1xFLAG Tag. The constructs were co-transfected into HEK293F cells with polyethylenimine (PEI; Sigma) and harvested after 16 h47 (link). GST-TRAIL-R1/R2-IcD and CD95-IcD were cloned into pGEX4T (GE Healthcare) and their respective fusion proteins produced in E coli2 (link),48 (link). Full-length FADD was cloned into the vector pTYB1 (NEB Inc.) and recombinant FADD (r-FADD) generated in E coli19 (link). Full-length procaspase-8b (MACHα2/Mch5b) was cloned in pcDNA3.1 (Invitrogen) and untagged proteins produced by in vitro transcription/translation (IVT) (Insect System; Qiagen), incorporating 35S-methionine (GE Healthcare)19 (link). Mutations were made using the Stratagene QuikChange Site-Directed Mutagenesis kit and confirmed by DNA sequencing. Proteins from c-FLIPS·Myc in pcDNA6.1 were produced by IVT (TNT T7-coupled reticulocyte lysate system; Promega).
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5

In Vitro Protein Translation Assay

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In vitro translation was carried out using the TNT® SP6 quick coupled transcription/translation system (Promega), in the presence of 35S-methionine (GE Healthcare), according to the manufacturer¿s instructions.
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6

In Vitro Binding of MAGI and E6 Proteins

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These assays were performed as described previously [43 (link)]. Briefly, Drosophila Magi and mammalian MAGI-1 proteins were transcribed and translated in vitro, using the TnT kit (Promega), and radiolabelled with [35S]-Methionine (GE Healthcare). They were incubated at 30°C for the indicated times, with or without the addition of similarly translated HPV-16 and HPV-18 E6 proteins. The remaining proteins were detected by SDS-PAGE and autoradiography.
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7

Radioactive Labeling Reagents Protocol

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[γ-32P]ATP and [35S]methionine were purchased from GE Healthcare (Munich), and 3H2O and [14C]sucrose were obtained from Biotrend (Cologne). SYBR Green Mix was from BioRad (Munich), the DyNAmo™ cDNA Synthesis Kit and Protein A magnetic beads were from New England Biolabs (Frankfurt am Main). Goat anti-(rabbit IgG)-alkaline phosphatase was obtained from Biomol (Hamburg). Purified KdpFABC protein was supplied by Marc Bramkamp (Osnabrück University). RNase-free deoxyribonuclease I was from Fermentas (St. Leon-Rot), and silicone oil (DC550) was from Serva (Heidelberg). All other reagents were reagent grade and obtained from commercial sources.
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