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23 protocols using jc 1 assay kit

1

Measuring Intracellular ROS and Mitochondrial Function

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To measure intracellular production of ROS, cells were collected and labeled in PBS containing 5 μM CM‐H2DCFDA (Sigma‐Aldrich) for 30 min. Cells were analyzed in a Becton Dickinson FACScan flow cytometer (Oxford) analysis. To measure superoxide level of mitochondria, cells were incubated with 5 μM MitoSOX (Invitrogen) for 30 min and analyzed by flow cytometry or confocal microscopy (FV1000; Olympus). Flow cytometric analysis of mitochondrial membrane potential was carried out by using a JC‐1 assay kit (Molecular Probes). Cells were incubated with 10 μg/mL JC‐1 for 10 min at 37°C.
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Mitochondrial Membrane Potential Assay

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The mitochondrial membrane potential (Δψm) was detected by the JC-1 assay kit (Molecular Probes, USA). Following treatment with sFlt-1, HUVECs were incubated with JC-1 for 30 min at 37°C and transferred to a 96-well plate. The red and green fluorescence were captured using a fluorescence plate reader. The changes in the ratio of red (excitation/emission, 550/600 nm) to green fluorescence (excitation/emission, 485/535 nm) was calculated in triplicates.
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3

Cellular effects of B2C compound

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SW620, DU145, and A549 cells were incubated
with B2C (10, 25, or 50 μM). For the detection of intracellular
ROS, cells were incubated with 2 μM DCFH-DA (Sigma-Aldrich)
for 15 min at 37 °C in the dark. For the analysis of apoptosis,
the cells were treated with Annexin V-FITC and propidium iodide purchased
from BD Biosciences Pharmigen (San Diego, CA). To demonstrate the
effect of B2C on the cell cycle, B2C-treated cells were stained with
propidium iodide (10 μg/mL) in the presence of RNase A. JC-1
assay kit (Molecular Probes, Eugene, OR) was used to study the mitochondrial
membrane potential. The stained cells were transferred to 5 mL round-bottom
tubes and examined using a flow cytometer (FACS Caliber, Becton Dickinson,
San Jose, CA).
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4

Investigating Anti-Cancer Mechanisms of KML001

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KML001 was a kind gift from Komipharm International (Seoul, Korea). Anti-P53, Horseradish Peroxidase (HRP)-conjugated goat anti-mouse IgG and goat anti-rabbit IgG were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Anti-phospho-Akt (Ser473), anti-Akt, anti-phospho-GSK3β, anti-PTEN, anti-caspase-3, anti-PARP, anti-β-actin were from cell signaling technology (Beverly, MA, USA). FITC annexin V apoptosis detection kit was obtained from BD Pharmingen (San Jose, CA, USA). JC-1 assay kit from Molecular Probes (Eugene, OR, USA). Immobilion-P polyvinylidene difluoride (PVDF) membranes (0.45 µm) were from Millipore (Bedford, MA, USA). Micro-BCA protein assay reagents and Chemiluminescent reagents were from Pierce (Rockford, IL, USA). MG132, Pan-caspase inhibitor, Puromycin, Akt inhibitor II were obtained from Calbiochem (La Jolla, CA, USA). Chloroquine was purchased from Sigma-Aldrich. LY294002 was purchased from LC Laboratories (Woburn, MA, USA).
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5

Evaluating Cytotoxicity and Apoptosis in Cancer Cells

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ALA (463-40-1) (0.914gm/ml) was purchased from TCI Chemicals (India) Pvt. Ltd. RPMI 1640 (Gibco, USA); fetal bovine serum (FBS) (Gibco-10270); trypsin (Gibco, USA); eagle balanced salt solution (EBSS)(Gibco, 2018-11); hank’s balanced salt solution (HBSS) (Himedia, TL1190); EtBr (Himedia, MB071); AO(Himedia, MB116); JC-1 assay kit (Thermo Scientific, M34152); PI (SC-3541); tamoxifen citrate (TMX) (Tammodex 20, Biochem Pharmaceuticals India); penicillin- streptomycin (Thermo Scientific, 15410-163); gentamycin (Thermo Scientific, 15710-049);3-(4, 5-Dimethyl-2-thiazolyl)-2, 5-diphenyl-2H-tetrazolium bromide (MTT) (Himedia, TC191); RNase (SRL, 58895); dimethyl sulfoxide (DMSO) (Merck, 1.16743.0521); DMBA (Sigma Aldrich, 57-97-6); ponceau S (Himedia, ML045); sodium cacodylate (Sigma Aldrich, C0250); collagenase type 4 (Himedia, TC-214); hyaluronidase (Himedia, TC331); hematoxylin (Himedia, S058); eosin (Himedia, S007); RIPA lysis buffer (Amresco, N653); protein assay kit (Amresco, M173); bovine serum albumin (BSA) (Genetix, PG-2330); transfer buffer (Genetix, GX-9411AR), trizol reagent (Sigma-T9424), cDNA synthesis kit (Genetix-K1612). Caspase 3 (SC-4263) and caspase 8 (SC-4267) assay kits were procured from Santacruz Biotechnology Inc., California, Delaware. All others chemicals were of molecular biology grade and purchased from Genetix Biotech Asia Pvt. Ltd, New Delhi.
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6

Mitochondrial Membrane Potential Analysis

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Mitochondrial membrane potential was determined using the JC1 assay kit (Thermo Fisher Scientific, San Jose, CA, USA) according to the manufacturer’s protocol. In brief, blastocysts were transferred to PBS+PVA containing JC1 at 38.5°C in a humidified atmosphere of 5% CO2 for 10 minutes. Thereafter, the blastocysts were washed several times with PBS+PVA. The ratio of the intensity of red fluorescence (aggregate molecules) to green fluorescence (monomer molecules) was evaluated using ImageJ (National Institutes of Health, Bethesda, MD, USA).
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7

Evaluating Mitochondrial Membrane Potential

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Cells were first allowed to settle in 6-well plates, after which they were treated with ivermectin for 24 h. A JC-1 assay kit (M34152; Thermo Fisher Scientific) was used to evaluate the mitochondrial membrane potential within these cells. The assessment was performed in strict accordance with the manufacturer’s guidelines. Readings from this assessment were captured using a flow cytometer (LSRFortessa; BD).
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8

Mitochondrial Membrane Potential Assay

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MMP was measured via staining with the JC-1 assay kit (Thermo Fisher Scientific Inc.) according to the manufacturer’s instructions. Briefly, the cells were pretreated with SA (100, 200, and 400 μM) for 24 h followed by treatment with 50 μM of 6-OHDA for another 12 h, after which they were incubated with 10 μg/mL of JC-1 dye for 20 min at 37 °C. JC-1-stained cells were observed using a fluorescence microscope equipped with iXon EMCCD cameras (Oxford Instruments, Oxfordshire, UK). Green fluorescence intensity was measured using a fluorescence spectrophotometer (Spectra Max M5) at 550 nm excitation and 600 nm emission wavelengths, respectively, whereas red fluorescence was measured at 485 nm excitation and 535 nm emission wavelengths, respectively.
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9

Evaluation of Oocyte Oxidative Stress Markers

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The ROS levels, GSH levels, and MMP levels in the oocytes were measured using a ROS detection kit (Beyotime, Shanghai, China), GSH level detection kit (Thermo Fisher Scientific, Waltham, MA, USA), and JC-1 assay kit (Thermo Fisher Scientific, Waltham, MA, USA), respectively. To determine the ROS levels in the oocytes, cumulus cell-free oocytes were cultured in PBS-PVA medium containing DCFH-DA (10 μM) for 30 min. To determine the GSH levels in the oocytes, cumulus cell-free oocytes were cultured in PBS-PVA medium containing CMF2HC (10 μM) for 30 min. To determine the MMP levels in the oocytes, cumulus cell-free oocytes were cultured in PBS-PVA medium containing JC-1 (2 μM) for 30 min. After incubation, the dye was washed off with PBS-PVA medium, and the fluorescence intensity of the oocytes was detected and captured using a fluorescence microscope and then saved as a Tiff file. The fluorescence signal intensity of each group of oocytes was analyzed using ImageJ software.
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10

Mitochondrial Depolarization in bEnd.3 Cells

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bEnd.3 cells were subjected to OGD 6/reoxygenation 24 h and ATN-161 treatments as described above. Mitochondrial depolarization was assessed using a JC-1 assay kit (Invitrogen, Paisley, UK). The cells were incubated in the dark upon JC-1 (10 μg/mL) treatment at 37 °C for 20 min, then washed thrice with HBSS and visualized using a ZOE Fluorescent Cell Imager (Bio-Rad, California, USA). The JC-1 monomer was photographed under excitation wavelength 460 nm and emission wavelength 530 nm, whereas the JC-1 polymer was photographed under excitation wavelength 520 nm and emission wavelength 590 nm. Cells exhibiting red (polymeric) fluorescence were considered to have normal mitochondria, while the cells were considered to have depolarized mitochondria if they exhibited green (monomeric) fluorescence.
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