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6 protocols using anti smad1 5 8

1

Immunohistochemical and Western Blot Analyses

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Anti-p-PDHE1α (S293, S300) (Calbiochem, San Diego, CA, USA, AP1062-1064, respectively) were used for immunohistochemistry. Anti-p-PDHE1α (S293, S300) (Abfrontier), Anti-SMAD1/5/8 (Santa Cruz Biotechnology, Dallas, TX, USA, sc-6031-R), anti-p-SMAD 1/5/8 (Cell Signaling Technology, Danvers, MA, USA, #9511), COXIV (Abcam, Cambridge, UK, ab16056) and anti-Flag (Sigma-Aldrich, F1804) antibodies were used for both immunofluorescence and western blotting. Anti-SMAD1 (Invitrogen, Carlsbad, CA, USA, #38-5400), anti-SMAD5 (Abgent, San Diego, CA, USA, AJ1726a), and Anti-SMAD1/5 (Santa Cruz Biotechnology, sc-6201) were used for immunofluorescence. Anti-α-tubulin (Applied Biological Materials, G098), anti-lamin B (Santa Cruz Biotechnology, sc-6216), anti-SMAD4 (Cell Signaling Technology, #9515) and anti-PDK4 serum (Abfrontier) were used for western blotting.
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2

Osteogenic Differentiation of C3H10T1/2 Cells

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C3H10T1/2 cells were obtained from ATCC (American Type Culture Collection, Manassas, VA). Recombinant adenovirus expressing exogenous BMP9 (Ad-BMP9) was kindly provided by Dr. Tong-chuan He of the University of Chicago Medical Center. The NICD overexpression plasmid was purchased from Genechem (Genechem Co., LTD, Shanghai, China). Dulbecco’s modified Eagle’s medium (DMEM) and fetal bovine serum (FBS) were both obtained from Gibco (Grand Island, NY, USA). DAPT was purchased from Cell Signaling Technology (CST; Danvers, MA, USA), and TPA was obtained from Beyotime (Beyotime Biotechnology, Shanghai, China). Anti-OCN, anti-JunB, anti-Runx2, anti-OPN and anti-β-actin antibodies were purchased from Abcam (MA, USA). Anti-Smad1/5/8, anti-p-Smad1/5/8, anti-PCNA, and anti-Cyclin D1 antibodies were obtained from Santa Cruz Biotechnology, Inc. (CA, USA). An anti-NICD antibody was purchased from CST. Unless otherwise indicated, all chemicals were purchased from Sigma-Aldrich (Saint Louis, USA).
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3

Jab1 Immunoprecipitation and Western Blot

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Cells and tissues were gently lysed with lysis buffer for 1 h on ice and then centrifuged at 15,000 g and 4 °C for 15 min, and the supernatant was collected. The soluble lysates were incubated with mouse anti-Jab1 antibody (#sc-13157, Santa Cruz Biotechnology) at 4 °C, and then with Protein A/G bead (Santa Cruz Biotechnology) and washed times. Immune complexes were eluted by boiling for 10 min at 95 °C in SDS sample buffer, followed by Western blot analysis with anti-Jab1 (1:1000, Cell Signaling), anti-Runx2 (1:1000; Cell Signaling Technology), or anti-Smad1/5/8 (1:1000; Santa Cruz Biotechnology) antibodies.
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4

Western Blot Analysis of Osteogenic Markers

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Western blot analysis was performed as in our previous report [63 (link)]. Briefly, the primary (anti-OCN, anti-OSX, anti-integrin α5, anti-integrin β1, anti-BMPR I, anti-BMPR II, anti-SMAD1/5/8, anti-P-SMAD1/5/8, anti-ERK1/2, anti-P-ERK1/2, anti-p38, anti-P-p38, anti-JNK, anti-P-JNK, or anti-β-actin; Santa Cruz Biotechnology) and secondary antibodies (goat anti-rabbit immunoglobulin G (IgG) or goat anti-mouse IgG conjugated to horseradish peroxidase) were employed with the dilutions recommended by the supplier. The blots were developed using enhanced chemiluminescence (Santa Cruz Biotechnology) and developed using X-ray film (Eastman-Kodak, Rochester, NY, USA).
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5

ChIP Assay on Hepatocytes

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The ChIP assay was performed according to the manufacturer’s protocol (Upstate). Briefly, mouse primary hepatocytes were treated with BMP6 and infected with Ad-GFP or Ad-Flag-SHP for 24 h. Cells were fixed with 1% formaldehyde and then harvested. Soluble chromatin was immunoprecipitated with anti-SMAD1/5/8 (Santa Cruz, cat. sc-6031-R), anti-SMAD1 (Cell Signaling, cat. 9743) and anti-Flag (for Flag-SHP) antibody. After recovering DNA, PCR was performed using primers encompassing the mouse Hepcidin promoter (forward 5′-GAGCCACAGTGTGACATCAC-3′, reverse 5′-GTCTAGGAGCCAGTCCCAGT-3′).
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6

Immunofluorescence Analysis of Transcription Factors

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Cells were fixed with 4% paraformaldehyde in PBS pH 7.4 for 10 min, washed with PBS (Sigma-Aldrich, Munich, Germany), and treated with 0.1% Triton X-100 (Sigma-Aldrich) for 5 min. Afterwards, cells were washed again and blocked with nonfat dry milk (Bio-Rad Laboratories) for 1 h. After washing, cells were incubated with primary rabbit anti-SMAD1/5/8 (1 : 200; Santa Cruz Biotechnology, Santa Cruz, CA, Germany) or anti-NFκB p65 (1 : 400; Cell Signalling Technology, Danvers, MA, USA) antibodies for 90 min and with CY3-conjugated goat anti-rabbit IgG (1 : 2,000; Abcam, Cambridge, MA, USA) for 45 min. Cells were observed under a 20x objective using an Axioplan 2 imaging microscope (Carl Zeiss). The images were captured with a PVCAM camera and the VisiView capturing software (Visitron Systems, Puchheim, Germany).
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