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Mmp 9 inhibitor 1

Manufactured by Santa Cruz Biotechnology
Sourced in United Kingdom, United States

The MMP-9 inhibitor I is a laboratory reagent designed to inhibit the activity of the matrix metalloproteinase-9 (MMP-9) enzyme. MMP-9 is an important target in various research areas, including cell biology, cancer research, and inflammation studies. This inhibitor can be used to investigate the role of MMP-9 in different cellular and biological processes.

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6 protocols using mmp 9 inhibitor 1

1

Immunofluorescence Analysis of Epithelial-Mesenchymal Transition

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hSAECs and SMARCA4 KD cells were plated on coverslips or transwell membrane. Human primary fibroblasts were plated on coverslips in the lower compartment of transwell chamber. After virus infection, with or without 5 µM MMP-9 inhibitor I (Santa Cruz, CAS 1177749-58-4), cells were fixed with 4% paraformaldehyde, permeablized with 0.1% Triton X-100, blocked with 5% goat serum and incubated with primary antibody overnight. Primary antibodies used were anti-Vimentin (Sigma, V6630); anti-E-Cadherin (cell Signaling, 3195); anti-Ki67 (Thermo, MA5-14520). On second day, Alexa-fluor goat secondary antibody and/or phalloidin (Thermo, A12380) were added. After 1 h, cells were washed and mounted using Prolong Diamond Antifade Mountant with 4’,6-diamidino-2-phenylindole (DAPI, Molecular Probes). To assay syncytia formation, fixed cells were stained with CellBrite (Biotium, 30090, 5 ul/1ml PBS), and mounted with Antifade Mountant containing DAPI. The cells were visualized with ECHO Revolve fluorescent microscope.
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2

Inhibition of MIF, HPA-1, and MMP-9 in HUVECs

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To inhibit MIF activity, HUVECs were cotreated for 24 h with NS1 and either 100 μM p425 (6,6ʹ-[(3,3-dimethoxy[1,1ʹ-biphenyl]-4,4ʹ-diyl)bis(azo)]bis[4-amino-5-hydroxy-1,3-napthalenedisulphonic acid] tetrasodium salt; Calbiochem, La Jolla, CA, USA) or 50 μM ISO-1 ((S,R)-3-(4-hydroxyphenyl)-4,5-dihydro-5-isoxazole acetic acid; Calbiochem). In addition, a rabbit anti-MIF polyclonal antibody (10 μg/ml) was used in this study and was purified from recombinant MIF-immunized rabbit serum using a protein G affinity column (GE Healthcare), as previously described [26 (link)]. To inhibit HPA-1, OGT 2115 (Tocris Bioscience, Bristol, UK) was used at the indicated concentration. To inhibit MMP-9, SB-3CT (Abcam, Cambridge, UK) and MMP-9 inhibitor I (Santa Cruz, Dallas, TX, USA) were used at the indicated concentrations. Control mouse and rabbit IgGs were purchased from LeadGene Biomedical (Taiwan).
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3

Antibody Toolkit for Extracellular Vesicle Analysis

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Anti-CD63 (MX-49.129.5), anti-TSG101 (EPR7130(B)), anti-Alix (EPR15314), anti-GRP94 (9G10) and anti-Calnexin (AF18) antibodies were purchased from Abcam (Cambridge, MA, USA). Anti-MMP2 (10373-2-AP), anti-MMP3 (17873-1-AP), anti-MMP9 (10375-2-AP), anti-urokinase-type plasminogen activator (uPA) (17968-1-AP) and anti-Cathepsin B (12216-1-AP) antibodies were purchased from Proteintech (Rosemont, IL, USA). Cell Counting Kit-8 (CCK-8) solution was purchased from Dojindo (Tokyo, Japan). Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS), dexamethasone, insulin, BCA protein assay, Matrigel matrix basement membrane and carboxyfluorescein diacetate succinimidyl-ester (CFSE) were obtained from Thermo Fisher Scientific (Waltham, MA, USA). Gelatin and 1-methyl-3-isobutylxanthine were purchased from Sigma-Aldrich (St. Louis, MO, USA). The MMP3 specific inhibitor UK 356618, MMP9 inhibitor I, cytochalasin D, cycloheximide and MMP-9 shRNA (m) lentiviral particles were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Polyvinylidene fluoride membrane, enhanced chemiluminescence reagents and Amicon ultra centrifugal filters (50 KD) were purchased from Millipore (Billerica, MA, USA).
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4

Modulating Oxidative Stress Responses

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Details of reagents administration are presented (Table 1). MMP-9 inhibitor I (sc-311437, Santa Cruz Biotechnology) was dissolved in DMSO to obtain a 5 mM stock solution, and applied to cells 12 h before addition of H2O2 (final concentration, 5 µM). SB431542 [TGF-β RI inhibitor, (HY-10431, MedChemExpress, New Jersey, USA)] and LY2109761 [TGF-β RI/II inhibitor, (HY-12075, MedChemExpress)] were dissolved in DMSO to prepare a 20 mM and 10 mM stock solution, respectively. SB431542 and LY2109761 were applied to cells (final concentration, 10 µM and 5 µM, respectively) which had been exposed to 400 µM H2O2 for 24 h. TGF-β1 RP (APA124Hu01, USCN Business Co., Ltd., Wuhan, China) was dissolved in PBS to prepare a 10 µg/ml stock solution and applied to cells at 15 ng/ml for 96 h. SB203580 (S8307-1MG, Sigma Aldrich; Merck KGaA, Darmstadt, Germany), a cytokine-suppressive anti-inflammatory drug, was used as a p38 MAPK inhibitor in this study. It was also dissolved in DMSO at 30 mM to prepare a stock solution. The cells were pretreated with SB203580 at 30 μM for 4 h before the addition of H2O2. R)-(+)-Limonene with a purity of 97% was purchased from Sigma Aldrich and diluted using culture medium prior to use. Cells were pretreated with R)-(+)-Limonene at 1000 µM for 4 h prior to addition of H2O2.
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5

Targeted Metalloproteinase Inhibition

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Batimastat at 20nM (Pan MMP inhibitor; BB-94; Selleck Chemicals); MMP-2/MMP-9 Inhibitor II at 50nM (sc-311430; Santa Cruz biotechnology); ARP 100 at 20nM (MMP2 inhibitor) (R&D Systems); MMP-13 Inhibitor at 10nM (sc-205756; Santa Cruz biotechnology); MMP-9 Inhibitor I at 100nM (sc-311437; Santa Cruz biotechnology); MMP-9/MMP-13 Inhibitor II at 10nM (sc-311439; Santa Cruz biotechnology); MMP2/MMP-3 Inhibitor I at 20uM (sc-295483; Santa Cruz biotechnology); TAPI-1 at 20uM (ADAM17 inhibitor; S7434; Selleck Chemicals); GI254023X at 200nM unless otherwise indicated (ADAM10 inhibitor; Sigma Aldrich); PF-00562271 at 5nM (FAK inhibitor; S2672; Selleck Chemicals).
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6

Targeted Metalloproteinase Inhibition

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Batimastat at 20nM (Pan MMP inhibitor; BB-94; Selleck Chemicals); MMP-2/MMP-9 Inhibitor II at 50nM (sc-311430; Santa Cruz biotechnology); ARP 100 at 20nM (MMP2 inhibitor) (R&D Systems); MMP-13 Inhibitor at 10nM (sc-205756; Santa Cruz biotechnology); MMP-9 Inhibitor I at 100nM (sc-311437; Santa Cruz biotechnology); MMP-9/MMP-13 Inhibitor II at 10nM (sc-311439; Santa Cruz biotechnology); MMP2/MMP-3 Inhibitor I at 20uM (sc-295483; Santa Cruz biotechnology); TAPI-1 at 20uM (ADAM17 inhibitor; S7434; Selleck Chemicals); GI254023X at 200nM unless otherwise indicated (ADAM10 inhibitor; Sigma Aldrich); PF-00562271 at 5nM (FAK inhibitor; S2672; Selleck Chemicals).
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