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Escherichia coli bl21 de3 competent cells

Manufactured by New England Biolabs
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Escherichia coli BL21 (DE3) competent cells are a strain of E. coli bacteria that are designed for efficient protein expression. They contain the DE3 lysogen, which allows for the expression of T7 RNA polymerase, enabling high-level expression of target proteins under the control of a T7 promoter.

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5 protocols using escherichia coli bl21 de3 competent cells

1

Expression and Purification of PAX8 and PRDM3

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The DNA fragment encoding PAX8(9–135)-LgBit was PCR‐amplified with primers comprising LguI restriction sites and cloned by Golden Gate into a pET‐derived vector with an N‐terminal His6‐ZZ‐Gly·Ser spacer‐HRV3C affinity purification and solubilizing tag. The DNA fragment encoding PRDM3 (75–434)-SmBit was PCR‐amplified with primers comprising LguI restriction sites for cloning by Golden Gate into a pET‐derived vector with an N‐terminal His6‐StreptagII-spacer‐Rbx‐Gly·Ser spacer‐HRV3C affinity purification and solubilizing tag. The DNA sequence of all expression constructs was verified by Sanger sequencing. The expression plasmids were transformed into BL21 (DE3)-competent Escherichia coli cells (New England Biolabs, Ipswich, MA) and grown overnight at 37 °C. LB medium was inoculated with a bacterial pre‐culture and incubated under constant shaking at 37 °C. At OD600 = 0.8, the culture was chilled to 18 °C, and protein expression was induced by the addition of 1 mM isopropyl β‐d‐1‐thiogalactopyranoside and run overnight. Bacterial cells were harvested by centrifugation at 4000 × g for 20 min, frozen on dry ice, and stored at −80 °C. Recombinant PAX8(9–135)-LgBit and PRDM3(75–434)-SmBit proteins were purified using different protocols.
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2

Recombinant FOXP3 and FOXP3-9R Proteins

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Plasmids encoding FOXP3 and 9R-conjugated FOXP3 (FOXP3-9R) were constructed for attachment of 9R to the C-terminus of FOXP3 protein (Supplementary Figure S1a). The plasmids were transfected into BL21 (DE3) competent Escherichia coli cells (New England Biolabs, Ipswich, MA, USA) [13 (link),20 (link)]. Protein expression was stimulated using 0.1 mM isopropyl 1-thio-b-d-galactopyranoside. The expressed proteins were purified using a Ni-nitrilotriacetic acid–agarose column (Invitrogen, Carlsbad, CA, USA), and dialyzed with phosphate-buffered saline (PBS). Sodium dodecyl sulfate–polyacrylamide gel electrophoresis (SDS-PAGE) was performed for determining the molecular weight of FOXP3-9R (Supplementary Figure S1b). The concentration of FOXP3 and FOXP3-9R protein was 0.3 mg/mL and 0.2 mg/mL, respectively. We diluted them using PBS to obtain the same concentration (0.1 mg/mL). The proteins were then stored at −80 °C.
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3

Isotopic Labeling of Tau Protein

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The gene encoding P2R tau (residues 198 to 399) contains a Tobacco Etch Virus (TEV) cleavage site and a His6 tag at the N terminus. This gene was cloned into a pET-28a vector and transfected into Escherichia coli BL21(DE3) competent cells (New England Biolabs). A starter culture was grown in 50 ml of LB medium containing kanamycin (50 μg/ml). After overnight growth at 37°C with 220 rpm shaking, 50 ml of overnight culture was used to inoculate 1 liter of LB medium containing kanamycin (50 μg/ml). Cells were grown at 37°C and 220 rpm until an optical density at 600 nm reached 1.0. Then, cells were spun down at 1000g and 4°C for 20 min, and the cell pellet was resuspended in 1 liter of minimal media containing M9 salts (1×), 15NH4Cl (1 g/liter), 13C glucose (2 g/liter), 1 mM MgSO4, 0.1 mM CaCl2, kanamycin (50 mg/ml), and vitamin/mineral supplements. Cells were grown in this minimal medium at 37°C and 220 rpm for 2 hours, then protein expression was induced with 1 mM isopropyl-β-d-thiogalactopyranoside (IPTG), and an additional 1 g of 13C glucose was added. Expression lasted 18 hours at 30°C with 180 rpm shaking. Expression of 0N4R tau was induced with 0.5 mM IPTG and lasted 5 hours at 37°C with 180 rpm shaking.
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4

Recombinant SUMO-MGME1 Protein Expression

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Unless specified otherwise, all chemicals were of the highest quality available, purchased from Fisher Scientific or Research Products International. Modified and unmodified oligodeoxynucleotides were from Integrated DNA Technologies and were desalting or HPLC grade. Escherichia coli BL21 (DE3) competent cells used for expression of the wildtype human MGME1 protein were from New England Biolabs. The pET28a(+) vector expressing the DNA sequence for SUMO-MGME1 with N-terminal SUMO-tag by NdeI/XhoI insertion was constructed based on a previous report (24 (link)).
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5

Escherichia coli Expression of GST-CRABPII

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GST-tagged CRAPBII protein was expressed in Escherichia coli BL21 (DE3) competent cells (New England Biolabs) transformed with a pGEX4T1-hCRABPII vector (canonical sequence UniProt P29373) optimized for expression in E. coli. Expression was started from 25 ml starter cultures (25 g l−1 LB broth, 100 µg ml−1 ampicillin), which were transferred to 1 l cultures after overnight incubation at 37°C. Expression was induced after 4 h of shaking (37°C, 150 rev min−1) with isopropyl β-d-1-thiogalactopyranoside (IPTG; final concentration of 1 mM in the culture) before shaking overnight for 20 h. The resulting cultures were pelleted using an Avanti Hi-Speed centrifuge (JLA 8.1000, 4000 rev min−1, 25 min, 4°C) before removal of the supernatant and freezing at −80 °C.
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