The largest database of trusted experimental protocols

3 protocols using cd45ra apc h7 clone hi100

1

Quantifying CD4+ T Cell Subsets

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD4+ T cell subsets were sorted on a BD FACSAria II cell sorter. The following antibodies were used: CD3-FITC (clone HIT3a, BD #555339), CD4-APC (clone SK3, BD #340443), CD45RA-APCH7 (clone HI100, BD #560674), CCR7-PE-Cy7 (clone 3D12, BD #557648), CD27-PE (clone M-T271, BD #555441) and LIVE/DEAD fixable Aqua (Invitrogen #L34957). Frequencies of memory CD4+ T cell subsets were determined as previously described after the exclusion of dead cells (LIVE/DEAD) (55 (link)). Four CD4+ T cell subsets were defined based on the expression of CD45RA, CCR7 and CD27: naïve (TN: CD45RA+, CCR7+, CD27+), central memory (TCM: CD45RA−, CCR7+, CD27+), transitional memory (TTM: CD45RA−, CCR7−, CD27+) and effector memory (TEM: CD45RA−, CCR7−, CD27−). Integrated HIV DNA was measured in the sorted populations. All subsets for which insufficient number of cells were analyzed (<40,000 sorted cells as measured in the PCR assay) were excluded from the analysis.
+ Open protocol
+ Expand
2

HIV-Flow Assay for Enriched CD4+ T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Enriched CD4+ T cells were processed for HIV-Flow assay50 (link). Briefly, after 1 h pre-incubation with 5 μg/ml Brefeldin A (BFA) and 24 h stimulation with of 162 nM PMA and 1 µg/ml ionomycin in the presence of ARVs (200 nM lamivudine and 200 nM raltegravir), extracellular staining was performed using the following antibodies: Live/Dead Aqua Cell Stain (ThermoFisher Scientific cat.L34957), CD45RA APC-H7 (clone HI100; BD cat.560674), CCR7 BB700 (clone 3D12; BD cat.566437), PD-1 BV605 (clone EH12.2H7; Biolegend cat.329924), TIGIT eF450 (clone MBSA43; eBioscience cat.48-9500-42), HLA-DR AlexaFluor700 (clone G46-6; BD cat.560743), ICOS BV785 (clone C398.4 A; Biolegend cat.313534), α4/CD49d PE-Cy7 (clone 9F10; Biolegend cat.304313) and β1/CD29 BB515 (clone MAR4; BD cat.564565). Cells were simultaneously fixed and permeabilized with the FoxP3 Buffer Set (eBioscience), followed by intracellular staining of HIV p24 with clone 28B7 APC (MediMabs cat.MM-0289-APC) and clone KC57 PE (Beckman Coulter cat.6604667). All samples were resuspended at a final concentration of 1 × 106 cells/ml in PBS and filtered prior to cell sorting.
+ Open protocol
+ Expand
3

Quantifying HIV Latency in Memory CD4+ T Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
CD4+ T cells were obtained by negative magnetic selection from 300 × 106 PBMCs and stained with the following antibodies: Live/Dead Aqua Cell Stain (ThermoFisher Scientific cat.L34957), CD8 PB (clone RPA-T8; BD cat.558207), CD14 V450 (clone MΦP9; BD cat.560349), CD45RA APC-H7 (clone HI100; BD cat.560674), α4/CD49d PE-Cy7 (clone 9F10; Biolegend cat.304313) and β1/CD29 BB515 (clone MAR4; BD cat.564565). Viable memory CD4+ T cells expressing VLA-4 (CD8-/CD14- CD45RA- α4high β1high) or not (CD8-/CD14- CD45RA- α4low/− β1low/−) were sorted in 5 mL FACS tubes. Cells were rested for 2 h at a final concentration of 1.5 million per mL, prior to serial dilution in culture plates (Costar) coated with 2.5 µg/ml anti-CD3 (clone OKT3) and 1 µg/ml anti-CD28 (clone CD28.2) antibodies as described elsewhere50 (link). MOLT-4 CCR5 + target cells (NIH HIV Reagent Program cat. ARP-4984) were added 2 days post-sort at a final concentration of 0.5 × 106 cells/mL and the culture was maintained for 21-days. Supernatants were collected at day 7, 11, 14, 18, and 21 for soluble HIV-p24 protein quantification by ELISA92 (link). Infectious units per million of cells (IUPM) were determined for each population based on the number of positive wells for soluble p24 protein (http://silicianolab.johnshopkins.edu/)93 (link).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!