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4 protocols using hucct1

1

Regulation of DLGAP1-AS2 in CCA Cells

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CCA cell lines HUCCT1 and RBE were obtained from the Shanghai Cell Bank (Shanghai, China). Normal bile duct cell HEBEpics was purchased from the ScienCell Research Laboratories (Carlsbad, CA, USA). Dulbecco's modified Eagle's medium supplemented with 10% FBS and 100 U·mL−1 penicillin–streptomycin was used to culture the cells at 37 °C with 5% CO.
DLGAP1‐AS2 negative control (si‐NC, 5′‐TTCTCCGAACGTGTCACGT‐3′), si‐DLGAP1‐AS2#1 (5′‐CUGGCUGCGAAGUAAUAAAUU‐3′), si‐DLGAP1‐AS2#2 (5′‐GGCAGGAAAUUGUGUUUGU UU‐3′), pcDNA3.1‐DLGAP1‐AS2, miR‐505 inhibitor, miR‐505 mimic, negative control (miR‐NC) and si‐GALNT10 (5′‐ATGAGTACGCAGAGTACAT‐3′) were synthesized by Dharmacon. HUCCT1 and RBE cells were transiently transfected with these sequences by Lipofectamine 2000 as directed by the supplier. After 48 h, the transfection efficiency was measured using qRT‐PCR. The transfected cells were used for subsequent experiments.
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2

Investigating PIMREG in CCA Cell Lines

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The human CCA cell lines HuCCT1 and RBE were purchased from Shanghai Cell Bank,
Chinese academy of medical sciences. The human CAA cell line HUH28 and human
extrahepatic biliary epithelial cells (HEBEpics) were obtained from American
ScienCell Research Laboratories. All the cells were incubated in Dulbecco’s
Modified Eagle Medium (DMEM; Gibco, Grand Island, NY, USA) containing 10% fetal
bovine serum (FBS) and antibiotics, and cultured in a 37°C incubator filled with
5% CO2. Small interference (si) RNAs against PIMREG (si-PIMREG#1:
5’-AGTGCTAGCATCAGATATTTGCTC-3’; si-PIMREG#2: 5’-TGACCTTGAGCCTTCTATTTGCTC-3’) and
an unspecific scrambled siRNA (si-con: 5’-GATCTTGTAGAACTTGTACCTAGT-3’) were
transfected into indicated cells to implement loss-of-function of PIMREG assays.
The plasmid pcDNA3.1-PIMREG vector and pcDNA3.1 empty vector were transfected
into indicated cells to perform gain-of-function of PIMREG assays. All the
si-RNAs and plasmids were acquired form GeneChem Corporation (Shanghai, China).
The Lipofectamine 2000 (Invitrogen, Carlsbad, CA, USA) was used to perform the
transfection process following the manufacturer’s instructions. Cells were
collected for subsequent experiments 48 hours after transfection. All cells used
in this report were taken in logarithmic phase.
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3

Culturing Human Cholangiocarcinoma Cell Lines

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Human cholangiocarcinoma cell lines HuCCT1 and CCLP1 were obtained from Shanghai Cell Bank and Chinese Academy of Science. All cell lines were cultured in Dulbecco’s modified Eagle’s medium (DMEM) (Gibco, USA) supplemented with 10% fetal bovine serum (FBS) (Gibco, USA) and 1% amphotericin B/penicillin/streptomycin (Beyotime, China) in a humidified incubator with 5% CO2 at 37 °C.
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4

Investigating miR-7-5p and MyD88 in ICC

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Our study used several ICC cell lines, of which HCCC-9810, HuCCT1, QBC-939, and RBE were purchased from the Shanghai Cell Bank, Chinese Academy of Sciences (Shanghai, China). The human primary intrahepatic biliary epithelial cell line HIBEC was purchased from ATCC (Manassas, VA, USA). All cells were cultured in DMEM (Thermo Fisher, Waltham, MA, USA) according to the manufacturer’s recommendations. Hsa-miR-7-5p mimics (miR115129142345-1-5), hsa-miR-7-5p inhibitor (miR2170523092350-1-5) and negative control vector were obtained from RiboBio (Guangzhou, China). MyD88 lentiviral activation particles (sc-417166-ACT) and control lentiviral activation particles (sc-437282) were purchased from Santa Cruz Biotechnology (Dallas, TX, USA). RBE cells were transfected with miR-7-5p mimics or negative control vector, co-transfected with miR-7-5p mimics and MyD88 lentiviral activation particles or control lentiviral activation particles. HIBEC cells were transfected with negative control vector or hsa-miR-7-5p inhibitor. Cells were transfected 24 h before experiments.
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