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6 protocols using anti itga2

1

Cell Lysis and Immunoblotting for Protein Analysis

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We used RIPA buffer (CWbio) containing 0.1 mg/mL PMSF (Keygen), protease inhibitor, and Phospho‐stop to lyse cells individually (Roche). The WB approach was the same as in our prior study.14 The following Abs were used: anti‐RAC1 (Proteintech 24,072‐1‐AP), anti‐FAK (Proteintech 12,636‐1‐AP), anti‐CSF (Proteintech 17,762‐1‐AP), anti‐TXNIP (Proteintech 18,243‐1‐AP), anti‐ITGA2 (Abcam ab133557), anti‐PAK (Abcam ab40852), anti‐pPAK (Abcam ab40795), and anti‐pFAK (CST 3283).
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2

Immunohistochemical Analysis of ITGA2

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Formalin-fixed, paraffin-embedded tissue samples were sectioned with a standard microtome at 3- to 5-μm thickness. After deparaffinization and rehydration, heat-induced (98°C) antigen retrieval was performed in a 10 mM sodium citrate buffer (pH 6.0) at a sub-boiling temperature for 10 min. The slides were incubated with hydrogen peroxide 3% (v/v) for 10 min, washed and blocked with 5% FBS in TBST for 1h at room temperature. Next, slides were incubated with primary antibodies anti-ITGA2 (1:500) (Abcam) at 4°C overnight. Primary antibodies were detected using a SignalStain® Boost IHC anti-rabbit HRP Reagent (Cell signaling Technology). The signal was visualized using a diaminobenzidine substrate kit (DAB, Thermo Fisher Scientific) according to the manufacturer’s instructions and nuclei were counterstained with hematoxylin.
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3

Immunofluorescence Analysis of Stem Cell Differentiation

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Cells were seeded at 10,000 cells/cm2 on 2PCA-functionalized
PA gels and cultured in BMP4- or GF-supplemented media for 7 days. Cells were
fixed in 4% paraformaldehyde (PFA; Fisher Scientific, #30525-89-4) in
Dulbecco’s PBS (Sigma-Aldrich, D1283) for 10 minutes. The samples were
treated with 0.1% sodium borohydride (Spectrum Chemical, S1187) for 10 minutes
to reduce nonspecific antibody binding with the PA gels, then permeabilized with
0.5% Triton-X100 (EMD Millipore, 9410) for 12 minutes. Samples were blocked with
5% goat serum (GS; Thermo Fisher Scientific, 16210064) for at least 1 hour then
incubated overnight in primary antibodies diluted in 1% GS at 4°C.
Samples were then washed in 1% GS and stained in secondary antibodies and 1: 400
DAPI (Sigma-Aldrich, 10236276001) diluted in 1% GS for 1 hr at room temperature.
The following antibodies and dilutions were used: 1:100 anti-TAZ clone M2-616
(produced in mouse, BD Biosciences, 560235), 1:100 anti-ITGA2 (produced in
mouse, Abcam, abl0800), 1:200 goat anti-mouse Alexa Fluor 647 conjugate (Thermo
Fisher Scientific, A21235). Samples were then washed in 1% GS then in PBS.
Representative images have background signal subtracted for display
purposes.
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4

Western Blot Analysis of Cell Signaling Proteins

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Total cell extracts were prepared in radioimmunoprecipitation assay buffer (20 mM Tris-HCL, pH 8.0, 137 mM NaCl, 1 mM MgCl2, 1 mM CaCl2, 10% glycerol, 1% NP-40, 0.5% sodium deoxycholate, 0.1% sodium dodecyl sulfate), containing a protease inhibitor cocktail (Sigma-Aldrich, P2714), and incubated at 4°C for 1 h. Western blotting was performed as previously described (Perez-Garcia et al., 2021 (link)). In brief, protein lysates were resolved by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto polyvinylidene difluoride membrane (Immobilon-P, Millipore). Membranes were blocked with 5% milk powder and incubated with primary antibody overnight at 4°C, followed by horseradish peroxidise (HRP)-conjugated secondary antibodies. Blots were probed with the following antibodies: anti-ITGA2 (1:1000, Abcam, ab181548), anti-JAG2 (1:1000, Cell Signaling Technology, 2210), anti-Cleaved NOTCH1 (1:1000, Cell Signaling Technology, 4147), anti-NOTCH1 (1:1000, Cell Signaling Technology, 3608), anti-TP63 (1:1000, Abcam, ab124762), anti-IRF7 (1:1000, Cell Signaling Technology, 4920) and anti-β actin (1:5000, Abcam, ab6276). Horseradish peroxidase-conjugated secondary antibodies (used at a dilution of 1:3000) were sourced from Bio-Rad. Detection was carried out with enhanced chemiluminescence reaction (GE Healthcare, RPN2209) using standard X-ray films.
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5

Immunohistochemical Analysis of Collagen and Integrin

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Formalin-fixed, paraffin-embedded tissue samples were sectioned with a standard microtome at 3- to 5 µm thickness. After deparaffinization and rehydration, heat-induced (98°C) antigen retrieval was performed in 10 mM sodium citrate buffer (pH 6.0) at a sub-boiling temperature for 10 mins. The slides were incubated with hydrogen peroxide 3% (v/v) for 10 min, washed and blocked with 5% FBS in TBST for 1 hr at room temperature. Next, slides were incubated with primary antibodies anti-COL1A1 (1:100) (Sigma-Aldrich) and anti-ITGA2 (1:500) (Abcam) at 4°C overnight. Primary antibodies were detected using a SignalStain Boost IHC anti-rabbit HRP Reagent (Cell signaling Technology). The signal was visualized using a diaminobenzidine substrate kit (DAB, Thermo Fisher Scientific) according to the manufacturer's instructions and nuclei were counterstained with hematoxylin. Immunostaining was scored by the weighted average score (intensity: 0–3, coloring: 0–100% of ITGA2 expression) by two trained scientists independently and discrepancies were resolved by consensus.
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6

Comprehensive Protein Expression Analysis

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Western blotting assay was conducted using the following antibodies: anti-ITGA2 (Abcam, ab137872), anti-FAK (Cell Signaling Technology (CST), #3285), anti-p-FAK (CST, # 8556), anti-Akt (CST, # 4685), anti-Vimentin (CST, #5741), anti-p-Akt (CST, #4060), anti-N-Cadherin (CST, #13,116), anti-E-Cadherin (CST, #3195), anti-GADH (Servicebio, GB11002).
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