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Rabbit anti epcam

Manufactured by Abcam
Sourced in China, United Kingdom, United States

Rabbit anti-EpCAM is an antibody that specifically binds to the Epithelial Cell Adhesion Molecule (EpCAM) protein. EpCAM is a cell surface protein expressed in various epithelial cells and is involved in cell-cell adhesion. This antibody can be used in applications such as immunohistochemistry, flow cytometry, and Western blotting to detect and analyze the expression of EpCAM.

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8 protocols using rabbit anti epcam

1

Whole-Mount Staining of Organoids

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For whole-mount staining, the organoids were first fixed using 4% paraformaldehyde (Thermo Fisher) for 30 min at room temperature and then permeabilized using 0.1% TritonX-100 (Sigma-Aldrich) in Tris-buffered saline (TBS) for 15 min. After blocking in DAKO (Agilent) for 1 h, organoids were incubated with primary antibodies overnight at 4°C. Next day, after triple washing, organoids were incubated in secondary antibodies (ThermoFisher) along with 4’, 6-diamidino-2-phenylindole (DAPI) for 1 h at room temp. The following primary antibodies were used: mouse anti-vimentin (Abcam), rabbit anti-calcitonin gene related peptide (CGRP) (Millipore Sigma), rabbit anti-EpCAM (Abcam), rabbit anti-synaptophysin (Abcam), mouse anti-chromogranin A (Proteintech), NCAM1 (Cell Signaling Technology). Confocal imaging was performed using Zeiss LSM 880.
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2

Culturing Human Bronchial Epithelial Cells

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Human bronchial epithelial (16HBE) cells were obtained from Shanghai Institute for Biological Science. Cells were cultured in RPMI 1640 (HyClone, UT, USA) supplemented with 100 U/mL penicillin, 100 mg/mL streptomycin, and 10% heat-inactivated fetal bovine serum (BIO International, Auckland, New Zealand). All cells were maintained at 37 °C in a humidified incubator with 5% carbon dioxide. Human recombinant CCN1 proteins were obtained from PeproTech (Shanghai, China). The rabbit anti-EpCAM as well as rabbit anti-CD31 were purchased from Abcam (HK, China). Mouse anti-CCN1 and horseradish peroxidase-coupled secondary antibodies were obtained from Santa Cruz Biotechnology (Santa Cruz, CA).
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3

Dual Immunofluorescence Labeling of Lung Sections

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The double immunofluorescence antigen labelling of frozen human lung sections was performed with LeA, LeX, SLeA and SLeX, with EpCAM antibody. The frozen human lung sections were fixed in Acetone/Ethanol (75:25) for 10 min and washed twice with TBS. The sections were blocked with 5% normal donkey serum (Jackson ImmunoResearch Lab Inc, West Grove PA) for an hour at room temperature. The sections were incubated with rabbit anti-EpCAM (1:300, Abcam, Cat#: ab32392) plus (1) FITC conjugated mouse anti-LeA (1:100, Santa Cruz, cat#: sc-51512) and (2) FITC conjugated mouse anti-human CD15 (LeX, 1:50); (3) mouse anti-SLeA (1:500, CA19.9) and (4) Rat anti-SLeX (1:200, BD 555946) overnight at 4 °C. The slides were washed three times in TBS and incubated with Alexa 647 conjugated donkey anti-rabbit secondary antibodies (Jackson ImmunoResearch Lab, 1:300) for (1) and (2) and CY3 conjugated donkey anti-mouse (Jackson ImmunoResearch Lab, 1:300) and Alexa 647 conjugated donkey anti-rabbit secondary antibodies (Jackson ImmunoResearch Lab, 1:300) for (3) and CY3 conjugated donkey anti-rat (Jackson ImmunoResearch Lab, 1:300) and Alexa 647 conjugated donkey anti-rabbit secondary antibodies (Jackson ImmunoResearch Lab, 1:300) for (4). Samples were then washed three times with TBS and mounted with Prolong Gold anti-fade mounting media containing DAPI (Invitrogen).
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4

Whole-mount Intestine Clearing and Imaging

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Foxl1 Cre; Rosa-mTmG and C57BL/6 adult mice were anesthetized, intestine was dissected and fixed in 4%PFA for 24hr at 4°C. Following washes with PBS for another 24hr at 4°C, the intestine was incubated in Hydrogel solution for 24hr at 4°C 27 (link). After 3hr at 37°C, the hydrogel-embedded intestine was placed in an X-CLARITYTM ETC chamber (LOGOS biosystems) for electrophoretic tissue clearing for 7hr. The cleared intestine was immunostained with goat anti-GFP (1:100; Abcam) or PDGFRα (1:100; R&D) and APC-conjugated anti-mouse EpCAM (1:100 Biolegend) or rabbit anti-EpCAM (1:100; Abcam). For Foxl1 antibody staining, following clearing an antigen retrieval in citrate buffer was performed (as described above). Primary and secondary antibodies were incubated for 48hr at 4°C each. The stained intestine was placed en block on an image slide using 1mm depth adhesive silicone isolator, mounted in X-CLARITYTM mounting solution and imaged using confocal scanning. Z-stacks projections were compiled using Volocity software.
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5

Whole-mount Intestine Clearing and Imaging

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Foxl1 Cre; Rosa-mTmG and C57BL/6 adult mice were anesthetized, intestine was dissected and fixed in 4%PFA for 24hr at 4°C. Following washes with PBS for another 24hr at 4°C, the intestine was incubated in Hydrogel solution for 24hr at 4°C 27 (link). After 3hr at 37°C, the hydrogel-embedded intestine was placed in an X-CLARITYTM ETC chamber (LOGOS biosystems) for electrophoretic tissue clearing for 7hr. The cleared intestine was immunostained with goat anti-GFP (1:100; Abcam) or PDGFRα (1:100; R&D) and APC-conjugated anti-mouse EpCAM (1:100 Biolegend) or rabbit anti-EpCAM (1:100; Abcam). For Foxl1 antibody staining, following clearing an antigen retrieval in citrate buffer was performed (as described above). Primary and secondary antibodies were incubated for 48hr at 4°C each. The stained intestine was placed en block on an image slide using 1mm depth adhesive silicone isolator, mounted in X-CLARITYTM mounting solution and imaged using confocal scanning. Z-stacks projections were compiled using Volocity software.
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6

Visualizing Isolated EpCAM-Negative CTCs

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Visualization of isolated subsets of stem EpCAM-negative CTCs was carried out on confocal microscope LSM 780 NLO (Carl Zeiss, On Cohen, Germany). In order to do that cell suspension after sorting was dried on glass with poly-l-lysin coating, fixated with cold methanol and incubated with 3% BSA in 1× PBS with 0.02% Tween 20 (Amresco, Dallas, TX, USA) during 45 min for preventing non-specific antibody binding. Further the primary antibodies rabbit anti-EpCAM (polyclonal, 1:2000, Abcam, Cambridge, UK) and goatanti-CK7 (polyclonal, 1:50, Santa Cruz Biotechnology, Dallas, TX, USA) in 1% BSA were added and incubated in dark during 30 min. Then were washed with PBS and after that the cocktail of second conjugated antibodies Anti-Rabbit IgG H&L (Cy3) (Abcam, Cambridge, UK) and Anti-Goat IgG H&L (AlexaFluor 647) (Abcam, Cambridge, UK) was added. Sections were covered by Mounting Medium with DAPI (Dako, Carpinteria, CA, USA) and analyzed with the laser scanning microscope LSM 780 NLO (Carl Zeiss, Oberkochen, Germany) with magnification ×630.
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7

Immunofluorescence staining of cells and tissues

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Tissues were fixed in Zn-formalin and embedded in paraffin prior to staining. Sections were deparaffinized, rehydrated and subjected to antigen retrieval. For staining cell lines, cells were fixed in 4% paraformaldehyde for 15 mins. For staining, sections and fixed cells were blocked in 5% donkey serum for 1 hour at room temperature (RT), incubated with primary antibodies for 1 hour at RT, washed, incubated with secondary antibodies for 1 hour at RT, washed and mounted. Primary antibodies used include goat anti-GFP (Abcam), rat anti-Ecadherin (Takara Bio), rabbit anti-Zeb1 (Santa Cruz), rabbit anti-Slug (gift of Dr. Joel Habener), rabbit anti-Vimentin (Cell Signaling Technologies), rabbit anti-Fsp1 (DAKO), rabbit anti-Rab5 (Cell Signaling Technologies), rabbit anti-Rab7 (Cell Signaling Technologies), rabbit anti-Rab11 (Cell Signaling Technologies), rabbit anti-EpCAM (Abcam), rabbit anti-Claudin-7 (Abcam), and rabbit anti-B-catenin (Cell Signaling Technologies). Zeb1 required additional tyramide signaling amplification (PerkinElmer). Slides were visualized using an Olympus IX71 inverted multicolor fluorescent microscope equipped with a DP71 camera. Select slides were also visualized using a Zeiss LSM 710 confocal microscope with Zen 2011 software.
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8

Visualizing Murine Colonic Cell Populations

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Colonic tissue was harvested from female PdgfraH2BeGFP mice, fixed for 1 hour at room temperature in 4% paraformaldehyde in PBS (ChemCruz/Santa Cruz Biotechnology, USA), and incubated O/N in 30% sucrose in PBS at 4°C. Tissue was then kept in a 1:1 mix of 30% sucrose and optimal cutting temperature (OCT) (TissueTek/Biosystems Switzerland) for 30 minutes at 4°C, before embedding in OCT and being cooled to −80°C. OCT-embedded tissue was cryosectioned using a Microm HM560 Cryostat (Thermo Fisher Scientific, Switzerland) at 5 μm, dried for 2 hours at room temperature before either being directly used for immunohistochemistry, or stored at −80°C. Standard immunohistochemical protocols were performed with the following primary antibodies (1:100 dilution): mouse-anti-Acta2 (Sigma, Germany), goat-anti-Pdgfra (R&D Systems, USA), chicken-anti-Vimentin (Millipore, USA), and rabbit-anti-EpCAM (Abcam, UK). Secondary antibodies (1:400 dilution) were anti-rabbit, anti-mouse, anti-goat antibodies conjugated with Alexa Dyes (A555, A598, or A647) (Thermo Fisher Scientific, Switzerland). Sections were counterstained with DAPI, mounted with FluorSave reagent (Sigma), imaged on a Leica SP8 laser scanning confocal microscope (Leica, Switzerland), and subsequently processed using ImageJ (FIJI).
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