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9 protocols using psmad2 ser465 467

1

Western Blot Analysis of PI3K/AKT Pathway

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Whole head and neck tissues and tumors tissues were lysed using a homogenizer (Pro Scientific) in lysis buffer (Roche) containing a pellet of protease inhibitor cocktail. Protein concentration was measured using Pierce 660 nm protein assay reagent (Thermo), and 40 μg of protein lysates were analyzed using the standard Western protocol we have described previously.37 (link) Blots were incubated with primary antibodies at 4°C overnight and secondary antibodies for 1 hour at room temperature. Western blots were imaged by ECL (Biorad) and normalized with respect to GAPDH (Cell Signaling, #5174) expression. The primary antibodies were as follows and purchased from Cell Signaling: p110α (#4255), PDK1 (#3438), pPDK1Ser241 (#3061), pAKTSer473 (#4058), pAKTThr308 (#9275), AKT1 (#2938), AKT2 (#4057), pSmad2 ser465/467 (#3101), and pSmad3ser423/425 (#9520). TGFβ1 ELISA was performed as described previously using the R&D systems kit.18 (link)
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2

Immunoblotting Analysis of TGF-β Signaling Proteins

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Total protein was extracted from NFPAs or normal pituitaries using lysis buffer (Applygen, Beijing, China) following the manufacturer’s instructions. The protein concentration was measured using the bicinchoninic acid method. Protein samples (30 μg) were separated by electrophoresis using 10% sodium dodecyl sulfate polyacrylamide gels, and then transferred to polyvinylidene difluoride membranes. The membranes were blocked with 5% bovine serum albumin in Tris-buffered saline containing 0.1% Tween 20, and incubated with rabbit antibodies against human Smad2 (1:1000; Cell Signaling Technology, Boston, MA, USA), p-Smad2 (Ser465/467) (1:1000; Cell Signaling Technology, Boston, MA, USA), Smad3 (1:1000; Cell Signaling Technology, Boston, MA, USA), p-Smad3 (Ser423/425) (1:1000; Cell Signaling Technology, Boston, MA, USA), and GAPDH (1:5000; Sigma-Aldrich, St. Louis, MO, USA). Subsequently, the membranes were incubated with the secondary antibody anti-rabbit IgG (1:4000; Jackson ImmunoResearch Laboratories, West Grove, PA, USA). Finally, the membranes were developed using an ultrasensitive chemiluminescence protein dye detection system (ECL Plus; Amersham Pharmacia Biotech, Piscataway, NJ, USA) and exposed to X-ray films (Kodak, Rochester, NY, USA). The bands were subjected to grayscale scanning and semi-quantitative analysis using Quantity One software (Bio-Rad, Hercules, CA, USA).
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3

Antibody Analysis of Cell Signaling

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The following antibodies were used: EPAC1 (# 4155), EPAC2 (# 4156), phospho-STAT3 (Tyr705) (# 9131), STAT3 (# 4904), SHP-1 (# 3759), SHP-2 (# 3397), SOCS3 (# 2923), LCK (# 2752), p-LCK (Try505) (# 2751), JAK2 (# 3230), SMAD2 (# 5339), p-SMAD2 (Ser465/467) (# 3108), and SMAD4 (# 9515) (Cell Signaling Technology, Inc., Danvers, MA). Actin–Cy3 (C 5838) (Sigma-Aldrich, St. Louis, MO).SMAD7 (sc-11392) (Santa Cruz Biotechnology, Dallas, TX).
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4

Dissecting TGF-β Signaling Pathways

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The adenoviral expression vectors for IKKβ, SMAD7, β-GAL, GFP and GFP-Cre were from Drs. Yi Zheng at the Cincinnati Children’s Hospital, Yinling Hu at the National Cancer Institute, and Chia-yang Liu at Indiana University. The reporter plasmids, NF-κB-luc, SBE-Luc, AP-1-Luc, and the TGFβ1, Tgfβ2 and Tgfβ3 promoter-luc were obtained from Drs. Edward B. Leof at Mayo Clinic and Alvaro Puga at the University of Cincinnati (Tojima et al., 2000 (link)). Expression vector for SOD2 was from Dr. Shanglin Shi at the University of Kentucky and Bdm-c-Jun was described before (Geh et al., 2011 (link)). TGFβ1 was from PeproTech, NAC, BSO and DPI were from Sigma-Aldrich, and SB505124 was from EMD Millipore. The following antibodies were used in the study: anti- IKKα, -IKKβ, -IkBα, and -p-SMAD2 (Ser-465, 467) from Cell Signaling, anti-pan TGFβ from R&D Systems, anti-α-SMA from Abcam, anti-β-actin from Sigma-Aldrich, anti-γH2AX from Novus Biologicals, anti-PolII, -H3, -H3K27Me3, H3K9Me2, H3K9Ac and H3K4Me3 from EMD Millipore, and anti-p65, -c-Jun, and IgG from Santa Cruz Biotechnologies.
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5

Western Blot Analysis of PI3K/AKT Pathway

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Whole head and neck tissues and tumors tissues were lysed using a homogenizer (Pro Scientific) in lysis buffer (Roche) containing a pellet of protease inhibitor cocktail. Protein concentration was measured using Pierce 660 nm protein assay reagent (Thermo), and 40 μg of protein lysates were analyzed using the standard Western protocol we have described previously.37 (link) Blots were incubated with primary antibodies at 4°C overnight and secondary antibodies for 1 hour at room temperature. Western blots were imaged by ECL (Biorad) and normalized with respect to GAPDH (Cell Signaling, #5174) expression. The primary antibodies were as follows and purchased from Cell Signaling: p110α (#4255), PDK1 (#3438), pPDK1Ser241 (#3061), pAKTSer473 (#4058), pAKTThr308 (#9275), AKT1 (#2938), AKT2 (#4057), pSmad2 ser465/467 (#3101), and pSmad3ser423/425 (#9520). TGFβ1 ELISA was performed as described previously using the R&D systems kit.18 (link)
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6

Immunoblotting for Protein Expression

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Odyssey Immunoblotting System (Li-COR Biosciences, USA) was employed. Antibodies against human VCAM-1 (1:100; Santa Cruz Biotechnology, USA; sc-8304), ERK5 (1:500; Upstate Cell Signaling Solutions, USA; #07–039), KLF4 (1:500; Santa Cruz Biotechnology; sc-20691), KLF2 (1:500; Santa Cruz Biotechnology; sc-28675), p-SMAD2 (Ser465/467; 1:200; Cell Signaling Technology, USA; #3108), SMAD2/3 (1:200; Cell Signaling Technology; #3102) and GAPDH (1:2000; Abcam, UK; ab9484) were used for detection of target proteins. Expression of target proteins was normalised to loading control, GAPDH. Data of each experimental condition are presented as fold changes in expression relative to their respective experimental controls.
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7

Investigating Cellular Signaling Pathways with Targeted Protein Modulation

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Human recombinant TGF-β1, PDGF and BMP4 were purchased from Biolegend (San Diego, CA). Fast-start universal SYBR Green master mix was from Roche, and sb431542, MG132 and chloroquine were from Sigma. The antibodies used for immunoblotting (IB): GAPDH 1:10000 (Sigma), β-actin 1:5000 (Santa Cruz),Smad2 1:1000 (Cell Signalling), Smad3 1:1000 (Cell Signalling), p-Smad2 (Ser465/467) 1:1000 (Cell Signalling), p-Smad3 (Ser423/425) 1:500 (Cell Signalling), IDH1 1:1000 (Origene), SP1 1:1000 (Sigma), α-tubulin 1:1000 (Santa Cruz), p-p38 1:1000 (Cell Signalling), p38 1:1000 (Cell Signalling), p-Erk1/2 1:2000 (Cell Signalling), Erk1/2 1:1000 (Cell Signalling), S100A4/FSP1 1:500 (Abnova), TGFBRI 1:1000 (Cell Signalling), TGFBRII 1:1000 (Abcam), p-TGFBRI 1:200 (Abcam), Cav1 1:1000 (ProteinTech), FKBP12 1:1000 (ProteinTech), and SARA 1:1000 (ProteinTech).
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8

Immunohistochemical Analysis of Aortic Tissue

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Paraffin-embedded thoracic aortic tissue samples from 4 heterozygous mutant and 4 wild-type mice from each time point were made. From these formalin (for embryos Bouin)-fixed, paraffin-embedded specimens, 5 μm-thick sections were made. Hematoxylin-eosin and Verhoeff-Von Giesson stainings were performed according to standard protocols. For immunohistochemistry, epitopes were unmasked using 1mM EDTA pH 8 buffer (not for actin) and auto-peroxidase activity was inhibited by incubation in 3% H2O2. Sections were blocked with 5% bovine serum albumin (Sigma-Aldrich). Antibodies directed against CTGF (Abcam), pSmad2 (Ser465/467) (Cell Signaling Technologies) and smooth muscle α-actin (Sigma-Aldrich) were used. Subsequently, sections were incubated with a secondary antibody, either biotinylated goat anti-rabbit IgG (pSmad2 and CTGF) (Vectastain) or Cy3-labeled donkey anti-goat (smooth muscle α-actin) (GE Healthcare). When the biotinylated secondary antibody was used, sections were incubated subsequently with ABC (Avidin: Biotinylated enzyme Complex) reagent (Vectastain) and DAB (3,3′-Diaminobenzidine) peroxidase (Vectastain). Sections were dehydrated in xylene and mounted with Entellan (Sigma Aldrich). When the Cy3-labeled antibody was used, sections were immediately mounted with aqueous mounting medium (Vectastain).
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9

Investigating TGF-β Signaling in Cancer Cells

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293 T cells (ATCC CRL-11268) and MDA-MB-231 cells (ATCC HTB-26) were cultured in Dulbecco’s modified Eagle’s medium (Corning, Lowell, MA) with 10% fetal bovine serum (Corning), 1% penicillin/streptomycin (Gibco, Carlsbad, CA), and 1% antimycotic solution (Gibco). The cells were incubated at 37°C with 5% CO2 in a humidified atmosphere. Antibodies to Flag, caspase-3, Bcl-xL, p-Smad2 (Ser465/467), and Smad2 were purchased from Cell Signaling Technology (Beverly, MA). Antibodies to CKB, actin, β-tubulin, LDHA, LDHB, and Smad7 were from Santa Cruz Biotechnology. Sno antibody was purchased from Upstate Biotechnology Inc. (Lake Placid, NY). Doxorubicin was purchased from Calbiochem (Darmstadt, Germany). Recombinant human TGF-β1 was purchased from R&D Systems (Minneapolis, MN). TGF-β type I receptor inhibitor (SB431542) was purchased from TOCRIS (Bristol, UK). 3TP-Lux and pCAGA12-Luc were kindly provided by Jae Youn Yi, Ph.D. (Korea Institute of Radiation and Medical Sciences, Seoul, Korea). NF-κB-Luc (Ju et al. 2011 (link)) and FHRE-Luc (Bianco et al. 2003 (link)) plasmids were previously described.
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