The largest database of trusted experimental protocols

A1 ti confocal microscope

Manufactured by Nikon
Sourced in Japan

The Nikon A1 Ti confocal microscope is a high-performance imaging system designed for advanced research applications. It features a sturdy titanium frame and offers high-resolution, multi-modal imaging capabilities, including confocal, super-resolution, and advanced fluorescence techniques. The A1 Ti provides researchers with a versatile platform for a wide range of scientific investigations.

Automatically generated - may contain errors

8 protocols using a1 ti confocal microscope

1

Blastocyst Cell Count Imaging Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total cell number of blastocyst stage embryos (66 hr after thawing) was counted following Hoechst 33342 staining and imaging using a Nikon A1‐Ti confocal microscope. The averages of cell number were calculated from five embryos (39, 36, 39, 33, and 46 cells) for the time‐lapse imaged, eight embryos (40, 32, 38, 42, 38, 38, 35, and 40 cells) for non‐imaged, and five embryos (42, 31, 38, 32, and 30 cells) for wild‐type, respectively.
+ Open protocol
+ Expand
2

Fixation and Immunostaining of γH2AX

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells after indicated treatment were fixed with ice-cold methanol (30 min at −20 °C), followed by 3× PBS washing, and then stained with anti-γH2AX Ab and DAPI. Cells were then photographed with a Nikon A1 Ti confocal microscope (Nikon, Japan).
+ Open protocol
+ Expand
3

Podocyte Mitochondrial Labeling Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Briefly, podocytes of each group was washed twice with PBS, and incubated with Mito Tracker Red CMXRos (200 nM) for 30 min at 37 °C. After incubation, cells were fixed with cold methanol for 15 min and were visualized using a Nikon A1Ti confocal microscope.
+ Open protocol
+ Expand
4

Immunofluorescence Staining of USP7 and SOX9

Check if the same lab product or an alternative is used in the 5 most similar protocols
Cells cultured in confocal dishes were fixed in 4% paraformaldehyde for 20 min and then permeabilized in 0.5% Triton X-100 in PBS for 30 min. After washing with PBS, the cells were blocked with 5% BSA for 60 min. Primary antibodies against USP7 and SOX9 and secondary antibodies [Alexa Fluor 594 goat anti-mouse immunoglobulin G (IgG) and Alexa Fluor 488 goat anti-rabbit IgG, Fudebio] were diluted in 5% BSA. Cells were first incubated with primary antibodies at 4°C overnight and subsequently incubated with secondary antibodies for 1 hour at room temperature. After washing three times in PBS, the cells were incubated in 4′,6-diamidino-2-phenylindole (Beyotime). Representative images were taken using a Nikon A1 Ti confocal microscope (Tokyo, Japan).
+ Open protocol
+ Expand
5

Quantifying Synapse Morphology from Patient IgG

Check if the same lab product or an alternative is used in the 5 most similar protocols
For functional analyses, IgG fraction from Patient 1 serum was purified via Protein G HP Ab Spin Trap Kit (GE Healthcare, Chicago, IL; 28-4083-47) according to the manufacturer's protocol. PHNs on coverslips were incubated at DIV14 for 20 minutes or 48 hours either with affinity-purified anti-Drebrin patient IgG fraction or with control IgG. After incubation, cells were washed, fixed, permeabilized, and blocked as described above. After incubation with primary (anti-Drebrin, ab12350, Abcam, 1:1,000; anti-Homer, 160004, Synaptic Systems, 1:1,000) and appropriate secondary antibodies, cells were washed and mounted. Images were taken with a laser-scanning Nikon A1/Ti confocal microscope.
For each condition, 3 biological and 6 technical replicates captured in 5 stacks (0.3μm steps) were analyzed. Synapses were identified by using Homer1 staining and analyzed by generating the maximum intensity projection (ImageJ). Intensity was set as a 20% threshold from the maximum intensity of the Homer1 staining. Synapse size was set between 0.02 and 0.4 μm 2 .
+ Open protocol
+ Expand
6

Immunofluorescence Staining of Mouse Aortic Sinus

Check if the same lab product or an alternative is used in the 5 most similar protocols
For immunofluorescence staining of cryo-sections from mouse samples, aortic sinus was first harvested, washed with PBS and fixed in 4% paraformaldehyde at 4°C for 2 h, followed by dehydration in 30% sucrose solution at 4°C overnight until fully penetrated. Tissues were then embedded in optimum cutting temperature (O.C.T., Sakura, 4583), frozen at -80°C for storage, or cut into 5-μm sections by a Cryostat (Leica CM1950). Cryosections were air-dried for about 30 mins at room temperature, blocked and permeabilized in 5% donkey serum (with 0.1% Triton X-100 in PBS) for 1 h, stained with primary antibodies overnight at 4°C, then incubated with Alexa Fluor-conjugated secondary antibodies (Invitrogen, 1:500) for 1 h, followed by DAPI staining and mounting in the anti-fade mounting medium. A Nikon A1 Ti confocal microscope was used to acquire cryo-section, en-face and cell staining images, further analyzed by relevant software. Regions were selected randomly to avoid biasing. For quantification of immunostaining images, at least 3 random fields of view containing the whole artery were counted and the mean values were taken as the data point for each mouse sample. The investigators were blinded to different groups when performing immunostaining and analyzing the data.
+ Open protocol
+ Expand
7

Immunohistochemical and Immunofluorescent Analysis of Lung Tissues

Check if the same lab product or an alternative is used in the 5 most similar protocols
Formalin-fixed and paraffin-embedded lung tissues were cut into sections of 3 um in thickness for immunohistochemistry (IHC). 4% paraformaldehyde-fixed lung tissues were cut into sections of 6 um in thickness for immunofluorescence (IF) staining. IHC and IF were performed as previously (31 (link)). The primary antibody used were SDF4 (1:100 dilution in 3% BSA), ATF6 (1:200 dilution in 3% BSA), GRP78 (1:200 dilution in 3% BSA) and CHOP (1:200 dilution in 3% BSA). Images were acquired using Leica DM4000 microscope and Nikon A1 Ti confocal microscope.
+ Open protocol
+ Expand
8

Visualizing Nuclear and Cytoskeletal Dynamics in Preimplantation Embryos

Check if the same lab product or an alternative is used in the 5 most similar protocols
To visualize nuclei, embryos were incubated with Hoechst 33342 (Invitrogen) in KSOM medium at 37°C with 5% CO2 for 30 min without fixation. EGFP‐Paxillin embryos were fixed with 4% PFA in PBS for 20 min at room temperature and then stained with rhodamine–phalloidin (Invitrogen) at room temperature for 30 min to visualize f‐actin. Golgi‐mCherry embryos were fixed with 4% PFA in PBS for 20 min at room temperature, and then Golgi apparatus was stained with mouse anti GM130 antibody (1:200, BD Biosciences, 610822) and an Alexa‐488‐conjugated secondary antibody (1:500, Invitrogen Co., Ltd). DAPI (nacalai tesque) was used as nuclear counterstain. Embryos were imaged on a Nikon A1‐Ti confocal microscope using a ×40/0.95 NA objective lens at the two‐cell, four‐cell, eight‐cell, and blastocyst stages.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!