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16 protocols using rabbit anti mouse igg

1

Immunoblot Analysis of Ataxin-3 Phosphorylation

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Equivalent protein amounts of each experimental condition were resolved and probed by SDS-PAGE followed by Western blot, performed according to standard protocols. Incubation with the primary antibodies diluted in 0.5% milk TBS-Tween 20 (TBS-T) was performed for 1–2 h at RT or overnight at 4°C, using a mouse monoclonal anti-atx3 antibody (1H9, 1:1,000; Millipore), the rabbit polyclonal anti-Patx3 (1:20; production described under Generation of the anti-Patx3 phosphospecific antibody), a mouse monoclonal anti-actin (β; 1:5,000; Sigma-Aldrich), or a rabbit polyclonal anti-Ub (1:1,000; Dako). The appropriate alkaline phosphatase-conjugated secondary antibodies (goat anti–mouse IgG and mouse anti–rabbit IgG; Jackson ImmunoResearch Laboratories) diluted in 0.5% milk TBS-T (1:10,000) were incubated for 1 h at RT. In the case of the anti-Patx3 antibody, 5% low-fat dry milk TBS-T was used in every step instead.
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2

Immunohistochemical Staining of Embryonic Tissues

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Sections, cultures, and whole embryos were blocked in PBS + 10% fetal bovine serum + 0.1% Triton X-100 for 30 min at room temperature and stained with anti-HNK-1 (ATCC; Manassas, VA), anti-SAHH (anti-32-5B6; DSHB, Iowa City, IA), anti-K-me1/2 (Ab23366; Abcam), anti-EF1α1 (Abgent), anti-cleaved caspase3 (rabbit anti-cl.casp3; Cell Signaling Technology), and anti–phospho-histone H3 (rabbit anti-pH3; EMD Millipore) followed by the appropriate secondary antibody (mouse AF488, rabbit AF568, mouse AF568 [Life Technologies]; or Cy2 anti–mouse/rabbit IgG, Cy5 anti–mouse/rabbit IgG, RRX anti–mouse IgM [Jackson ImmunoResearch Laboratories, Inc.]) as indicated. For some assays the signal was amplified using a mouse anti–rabbit IgG (Jackson ImmunoResearch Laboratories, Inc.).
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3

Western Blot Analysis of Nuclear Receptor Proteins

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Proteins were separated by Sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) (Bio-Rad, Hercules, CA, USA) and blotted onto PVDF membrane (MerckMillipore, Darmstadt, Germany). Primary antibodies used were LXRα (PP-K8607, R&D systems; 1:1000), LXRα LBD (PP-PPZ0412-00, R&D systems, Minneapolis, MN, USA; 1:1000), LXRβ (PP-K8917-00, R&D systems, Minneapolis, MN, USA; 1:1000), RXRα (sc-553, Santa Cruz Biotechnology, Dallas, TX, USA; 1:1000), ChREBP (NB400-135, Novus Biologicals, Littleton, CO, USA; 1:1000), FLAG (F1804; Sigma-Aldrich, St. Louis, MO, USA; 1:1000) and β-actin (A5441; Sigma-Aldrich, St. Louis, MO, USA; 1:1000). Secondary antibodies used were horseradish peroxidase-conjugated goat anti-mouse IgG or mouse anti-rabbit IgG (115-035-174 and 211-032-171, Jackson ImmunoResearch Laboratories, West Grove, PA, USA; both 1:10,000).
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4

Immunoprecipitation and Immunoblotting Assay

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Cells were lysed with lysis buffer (50 mM Tris-HCl, pH 7.4, 1 mM EDTA, 150 mM NaCl, and 1% Triton X-100) containing 1× Protease Inhibitor Cocktail (Roche, Indianapolis, IN) and 1× Phosphatase Inhibitor (Beyotime). Supernatants were separated and incubated with anti-FLAG (F3165; Sigma), anti- OGT (ab96718, Abcam), anti-KAT5 (sc166323; Santa), or anti-c-Myc (10828-1-AP; Proteintech Group Inc.) overnight at 4 °C. Protein-antibody complexes were incubated with protein A/G agarose beads (Millipore) for 4 h. The complexes were eluted and resolved to immunoblotting with the indicated antibodies. The horseradish peroxidase-conjugated secondary antibody was goat anti-mouse IgG (ab6789; Abcam) or mouse anti-rabbit IgG, light chain specific (211-032-171; Jackson ImmunoResearch, Lancaster, USA).
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5

Characterization of RalGAP-SERCA2a Interaction

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Protein G-Sepharose was purchased from GE Healthcare (Little Chalfont, Buckinghamshire, UK). Precast NuPAGE® Bis-Tris gels were from Thermo Fisher Scientific (Waltham, MA, USA). NE and AngII were bought from MedChemExpress (Shanghai, China). All other chemicals were from Sigma-Aldrich (Shanghai, China) or Sangon Biotech (Shanghai, China). The commercial primary antibodies used in this study are listed in Supplementary Table 1, and used at a dilution of 1:1000 for immunoblotting. The RalGAPα1, RalGAPα2 and RalGAPβ antibodies were described previously14 (link), and used at a dilution of 1:1000 for immunoblotting. The antibody recognizing pThr484-SERCA2a was as previously reported7 (link), and used at 1 µg/ml for immunoblotting. Horseradish peroxidase (HRP)-conjugated goat anti-rabbit IgG (Cat No. 111-035-003), mouse anti-rabbit IgG (211-002-171), goat anti-mouse IgG (Cat No. 115-035-003) and goat anti-mouse IgG (115-005-174) were from Jackson ImmunoResearch Labs, and used at a dilution of 1:5000. Plasmids for RalGAPα1, RalA and SERCA2a were reported previously7 (link),16 (link).
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6

Western Blot Analysis of Cellular Proteins

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Protein samples were quantified by Bradford assay using PRO-Measure solution (Intron, #21011) and subjected to protein electrophoresis (SDS-PAGE). Gels were blotted by wet transfer using a Bio-Rad Power Pac at 350 V for 1 or 2 h. Membranes were blocked and incubated with primary antibodies for overnight at 4 ℃. After washing, the membranes were incubated with secondary antibodies overnight at 4 °C. Next, after a washing step, the protein bands were detected using an ECL kit (XLS025-0000, Cyanagen) on the ChemiDoc system (Fusion Solo, Vilber Lourmat).
The primary antibodies used were: β-actin [Rabbit polyclonal antibody (Rab Poly Ab), Santa Cruz, sc-130656], HK1, HK2, PKM2, PDH [Rab Poly Ab, Cell Signaling Technology (CST), #8337], eIF2α (Rab Poly Ab, CST, #9722), peIF2α [Rabbit monoclonal antibody (Rab mono Ab), CST, #3597], CHOP (Mouse Monoclonal antibody, Invitrogen, #MA1-250), ANP (Rab poly Ab, Abcam, ab14348), SPT1 (Rab poly Ab, ABclonal, A6750), and PGRMC1 (Rab mono Ab, CST, #13856). The secondary antibodies used were: Mouse anti-rabbit IgG (211-032-171, Jackson ImmunoResearch, 1:5000) and Goat anti-mouse IgG antibody (BS-0296G-HRP, Bioss, 1:5000).
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7

Antibody Delivery via Electroporation

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Electroporation was performed using the Neon® Transfection System (Thermo Fisher). Cells were washed with PBS and resuspended in Buffer R (Thermo Fisher) at a concentration of 8 x 10 7 cells ml -1 . For each electroporation reaction 8 x 10 5 cells (10.5 µl) were mixed with 2 µl of antibody or mRNA or protein to be delivered. The mixture was taken up into a 10 µl Neon® Pipette Tip (Thermo Fisher) and electroporated using the following settings: 1400V, 20 ms, 2 pulses. Electroporated cells were transferred to medium supplemented with 10% Calf Serum without antibiotics. Antibodies used for electroporation were rabbit anti-IκBα (E130, Abcam ab215972), mouse anti-myc (9E10; sigma, 05-419), mouse anti-Ad5 Hexon clone 9C12 (Foss et al., 2016) , rabbit anti-mouse IgG (Jackson ImmunoResearch; 315-005-045), rabbit anti-GFP (Proteintech 50430-2-AP; 1:1000), rabbit anti-GFP (Abcam, ab6556), mouse anti-GFP (9F9.F9, abcam, ab1218), mouse anti-GFP (7.1+13.1, Roche, 11814460001) and normal rabbit IgG (Millipore 12-370).
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8

Cryo-immunogold Labeling of Ultrathin Sections

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Tissue pieces were fixed in 4% paraformaldehyde in 0.1 M phosphate-buffered saline (PBS) with 2.5% sucrose for 6 h at RT then immersed and stored in 2.3 M sucrose in PBS. Tissue pieces were placed on specimen stubs and frozen in liquid nitrogen. Ultrathin sections (70 nm) were cut with a Leica EM UC7 cryo-ultramicrotome. For immunolabelling, ultrathin sections were incubated in 0.1 % glycine + PBS followed by incubation in 1% bovine serum albumin in PBS. All washes and antibody dilutions were performed in PBS + 1% bovine serum albumin. After incubation with the primary antibodies the sections were incubated with Protein A-gold conjugate (10 nm). Rabbit anti-mouse IgG (Jackson ImmunoResearch Europe Ltd, UK) was used as a secondary antibody. Sections were embedded in methylcellulose and examined in a Tecnai Spirit transmission electron microscope (FEI Company, Eindhoven, the Netherlands) equipped with a Quemesa digital camera (EMSIS GmbH, Münster, Germany). The antibodies used were the same as for IHC.
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9

Flow Cytometric Analysis of Cell Surface Markers

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Cells were collected with PBS-5mM EDTA. 5x105 cells were incubated in 100μL of 5μg/mL mouse IgG or 33B7 mAb in DMEM + 1% FBS for 1-hour at 4°C. Cells were then washed in 200μL cold PBS, and incubated with 10μg/mL Rabbit-anti-Mouse IgG (Jackson ImmunoResearch Laboratories, Cat. 315-005-003) in DMEM + 1%FBS for 1-hour at 4°C. Cells were then washed in 200μL cold PBS, and incubated in 20μg/mL Goat-anti-Rabbit-Alexa 647 in DMEM + 1% FBS for 1-hour at 4°C (Jackson ImmunoResearch Laboratories, Cat. 111-605-045). Cells were washed in 200μL cold PBS, then re-suspended in 160μL PBS, and binding was measured using an Intellicyt Flow Cytometer (Intellicyt HTFC Screening System).
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10

Antibody Generation and Reagent Sourcing

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The rabbit polyclonal antibodies specific to ADD1 pS12 and pS355 were generated using synthesized peptides C-SRAAVVTpSP and C-KSRpSPGSPVGE, respectively, as antigens (GeneTex, Inc.). The rabbit anti-ADD1 (H-100), mouse anti–β-tubulin (D-10), mouse anti–cyclin B1, and mouse anti-Myo10 (C-1) antibodies were purchased from Santa Cruz Biotechnology, Inc. The mouse anti-FLAG (M2), rabbit anti-FLAG, mouse anti–α-tubulin (DM1A), mouse anti-GFP (B-2), mouse anti–β-actin antibodies, and nocodazole were purchased from Sigma-Aldrich. The mouse anti-T7 antibody was purchased from EMD Millipore. The mouse anti-GFP antibody and X-tremeGENE HP were purchased from Roche. The HRP-conjugated goat anti–rabbit or goat anti–mouse antibodies and rabbit anti–mouse IgG were purchased from Jackson ImmunoResearch Laboratories, Inc. Alexa Fluor 488– and Alexa Fluor 546–conjugated secondary antibodies and Lipofectamine were purchased from Invitrogen. The CDK1 inhibitor RO-3306 was purchased from Enzo Life Sciences. Purified CDK1/cyclin B1 was purchased from EMD Millipore.
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